C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000405276 RP11-204C16.4-001 ENSG00000217624 9606 - X:41675760-41676494 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000405276
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000405276 0.016±0.00 0.103±0.00 0.122±0.00 0.137±0.03 0.250±0.20 0.047±0.00 0.085±0.05 0.039±0.02 0.254±0.24 0.161±0.00 0.015±0.00 0.526±0.51 0.021±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001X6 CIL_0001X6_0002 CGP X:41447434-41923463
CIL_0001JA CIL_0001JA_0002 CGP X:41514934-41923463

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110362 Ywhaz-003 protein_coding Mus_musculus 0 1003
ENSMUST00000022894 Ywhaz-002 protein_coding Mus_musculus 0 1003
ENSMUST00000110361 Ywhaz-001 protein_coding Mus_musculus 0 1003
ENSMUST00000169025 Gm4202-201 pseudogene Mus_musculus 0 992
ENSMUST00000154879 Ywhaz-007 retained_intron Mus_musculus 0 915
ENSMUST00000126184 Ywhaz-006 protein_coding Mus_musculus 0 370
ENSMUST00000151635 Ywhaz-005 protein_coding Mus_musculus 1.4013e-45 187
ENSMUST00000168856 Gm17181-001 processed_pseudogene Mus_musculus 2e-34 150
ENSMUST00000110359 Ywhaz-004 protein_coding Mus_musculus 2e-28 130

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