C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 17181
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168856 Gm17181-001 ENSMUSG00000091123 10090 + 1:87514175-87514297 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyPlacentaENSMUST00000168856
Transcript ID Kidney Placenta
ENSMUST00000168856 1675.860±171.86 38.096±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HR CIL_0003HR_0002 CGP 1:87470271-87573870
CIL_0003HS CIL_0003HS_0002 CGP 1:87476834-87597845
CIL_0003HY CIL_0003HY_0002 CGP 1:87509889-87720507

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000353245 YWHAZ-002 protein_coding Homo_sapiens 1e-35 156
ENST00000395948 YWHAZ-008 protein_coding Homo_sapiens 4e-36 156
ENST00000395951 YWHAZ-011 protein_coding Homo_sapiens 5e-36 156
ENST00000395953 YWHAZ-009 protein_coding Homo_sapiens 5e-36 156
ENST00000395956 YWHAZ-004 protein_coding Homo_sapiens 1e-35 156
ENST00000395957 YWHAZ-001 protein_coding Homo_sapiens 3e-35 156
ENST00000395958 YWHAZ-201 protein_coding Homo_sapiens 1e-35 156
ENST00000399764 YWHAZP6-001 processed_pseudogene Homo_sapiens 3e-31 139
ENST00000405276 RP11-204C16.4-001 processed_pseudogene Homo_sapiens 2e-34 150
ENST00000415292 YWHAZP3-001 processed_pseudogene Homo_sapiens 3e-36 156
ENST00000419477 YWHAZ-010 protein_coding Homo_sapiens 4e-36 156
ENST00000440317 YWHAZP2-001 processed_pseudogene Homo_sapiens 7e-33 145
ENST00000457309 YWHAZ-202 protein_coding Homo_sapiens 1e-35 156
ENST00000480304 YWHAZ-003 retained_intron Homo_sapiens 1e-35 156
ENST00000517727 YWHAZ-016 retained_intron Homo_sapiens 0.000000000000006 86
ENST00000518736 YWHAZ-015 retained_intron Homo_sapiens 0.000000000000006 86
ENST00000521309 YWHAZ-012 protein_coding Homo_sapiens 7e-36 156
ENST00000521607 YWHAZ-017 protein_coding Homo_sapiens 4e-36 156
ENST00000522542 YWHAZ-013 protein_coding Homo_sapiens 7e-36 156
ENST00000522819 YWHAZ-022 protein_coding Homo_sapiens 4e-36 156
ENST00000523848 YWHAZ-019 nonsense_mediated_decay Homo_sapiens 3e-36 156

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