C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001JA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059809-ENSDARG00000059809 CGP 7955 9:34399991-34510918
GeneTranscriptPositionBiotype
ENSDARG00000002959 (gpr34b)
G protein-coupled receptor 34b 		ENSDART00000024795 (gpr34b-001) 34451277-34452629 protein_coding
ENSDARG00000093418 (GPR82)
G protein-coupled receptor 82 		ENSDART00000141542 (GPR82-001) 34456478-34460343 protein_coding

Danio rerio Ensembl (Zv9)

Genome
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Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
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CIL_0001JA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147044-ENSG00000147044 CGP 9606 X:41514934-41923463
GeneTranscriptPositionBiotype
ENSG00000147044 (CASK)
calcium/calmodulin-dependent serine protein kinase (MAGUK family) 		ENST00000378154 (CASK-006) 41559497-41923463 protein_coding
ENST00000378158 (CASK-001) 41519653-41923339 protein_coding
ENST00000378163 (CASK-007) 41519265-41923463 protein_coding
ENST00000378166 (CASK-005) 41520090-41923015 protein_coding
ENST00000378168 (CASK-012) 41519549-41561627 protein_coding
ENST00000378179 (CASK-002) 41519527-41589951 protein_coding
ENST00000421587 (CASK-004) 41514934-41923012 protein_coding
ENST00000442742 (CASK-013) 41520336-41923007 protein_coding
ENST00000468986 (CASK-008) 41743613-41923015 processed_transcript
ENST00000469265 (CASK-011) 41635728-41665431 processed_transcript
ENST00000472704 (CASK-003) 41552605-41578453 processed_transcript
ENST00000477823 (CASK-009) 41786810-41922982 processed_transcript
ENST00000486402 (CASK-010) 41660101-41665832 processed_transcript
ENSG00000171657 (GPR82)
G protein-coupled receptor 82 		ENST00000302548 (GPR82-001) 41724155-41730135 protein_coding
ENST00000497180 (GPR82-002) 41728133-41728771 processed_transcript
ENSG00000171659 (GPR34)
G protein-coupled receptor 34 		ENST00000378138 (GPR34-002) 41689006-41697273 protein_coding
ENST00000378142 (GPR34-001) 41688973-41697277 protein_coding
ENST00000620846 (GPR34-201) 41689050-41696779 protein_coding
ENSG00000217624 (RP11-204C16.4)
 ENST00000405276 (RP11-204C16.4-001) 41675760-41676494 processed_pseudogene
ENSG00000229822 (RP5-1174J21.2)
 ENST00000451332 (RP5-1174J21.2-001) 41748222-41748608 processed_pseudogene
ENSG00000233033 (CASK-AS1)
CASK antisense RNA 1 		ENST00000451126 (CASK-AS1-001) 41520036-41522336 antisense
ENSG00000242559 (RN7SL144P)
RNA, 7SL, cytoplasmic 144, pseudogene 		ENST00000475761 (RN7SL144P-201) 41683168-41683462 misc_RNA
CIL_0001JA_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031012-ENSMUSG00000031012 CGP 10090 X:13517080-13851367
GeneTranscriptPositionBiotype
ENSMUSG00000031012 (Cask)
calcium/calmodulin-dependent serine protein kinase (MAGUK family) 		ENSMUST00000033321 (Cask-002) 13521331-13846556 protein_coding
ENSMUST00000115435 (Cask-005) 13521782-13526768 protein_coding
ENSMUST00000115436 (Cask-201) 13517080-13846541 protein_coding
ENSMUST00000115438 (Cask-001) 13517080-13846578 protein_coding
ENSMUST00000124710 (Cask-006) 13626280-13846088 protein_coding
ENSMUST00000128012 (Cask-011) 13571103-13677594 protein_coding
ENSMUST00000128095 (Cask-004) 13522080-13537669 protein_coding
ENSMUST00000132240 (Cask-009) 13714731-13851367 processed_transcript
ENSMUST00000139735 (Cask-008) 13533340-13559331 protein_coding
ENSMUST00000152358 (Cask-010) 13554584-13846578 retained_intron
ENSMUST00000155989 (Cask-007) 13846090-13846735 processed_transcript
ENSMUST00000156096 (Cask-003) 13517080-13786030 protein_coding
ENSMUSG00000040229 (Gpr34)
G protein-coupled receptor 34 		ENSMUST00000041708 (Gpr34-001) 13632089-13640856 protein_coding
ENSMUST00000096492 (Gpr34-201) 13632769-13640858 protein_coding
ENSMUSG00000047678 (Gpr82)
G protein-coupled receptor 82 		ENSMUST00000053659 (Gpr82-001) 13661363-13667433 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001JA_0001ENSDARG00000002959ENSDART00000024795ENSDARG00000093418ENSDART00000141542CIL_0001JA_0002ENSG00000147044ENST00000378154ENST00000378158ENST00000378163ENST00000378166ENST00000378168ENST00000378179ENST00000421587ENST00000442742ENST00000468986ENST00000469265ENST00000472704ENST00000477823ENST00000486402ENSG00000171657ENST00000302548ENST00000497180ENSG00000171659ENST00000378138ENST00000378142ENST00000620846ENSG00000217624ENST00000405276ENSG00000229822ENST00000451332ENSG00000233033ENST00000451126ENSG00000242559ENST00000475761CIL_0001JA_0003ENSMUSG00000031012ENSMUST00000033321ENSMUST00000115435ENSMUST00000115436ENSMUST00000115438ENSMUST00000124710ENSMUST00000128012ENSMUST00000128095ENSMUST00000132240ENSMUST00000139735ENSMUST00000152358ENSMUST00000155989ENSMUST00000156096ENSMUSG00000040229ENSMUST00000041708ENSMUST00000096492ENSMUSG00000047678ENSMUST00000053659
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001JA_0001ENSDARG00000002959ENSDART00000024795ENSDARG00000093418ENSDART00000141542CIL_0001JA_0002ENSG00000147044ENST00000378154ENST00000378158ENST00000378163ENST00000378166ENST00000378168ENST00000378179ENST00000421587ENST00000442742ENST00000469265ENSG00000171657ENST00000302548ENST00000497180ENSG00000171659ENST00000378138ENST00000378142ENST00000620846ENSG00000217624ENST00000405276ENSG00000229822ENST00000451332ENSG00000233033ENST00000451126ENSG00000242559ENST00000475761CIL_0001JA_0003ENSMUSG00000031012ENSMUST00000033321ENSMUST00000115436ENSMUST00000115438ENSMUST00000128012ENSMUST00000128095ENSMUST00000152358ENSMUST00000156096ENSMUSG00000040229ENSMUST00000041708ENSMUST00000096492ENSMUSG00000047678ENSMUST00000053659
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002959 ENSDART00000024795 N/A N/A N/A 0.228±0.07 N/A N/A 0.113±0.02 0.394±0.00 N/A N/A 0.066±0.00 N/A N/A N/A
ENSDARG00000093418 ENSDART00000141542 N/A N/A N/A 0.693±0.39 N/A N/A 1.741±0.24 2.817±0.00 N/A N/A 0.122±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147044 ENST00000378154 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.199±0.00 N/A N/A N/A N/A
ENST00000378158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.297±0.00 N/A 0.362±0.00
ENST00000378163 1.125±0.00 2.188±0.00 0.584±0.00 N/A 1.355±0.00 2.164±0.65 0.679±0.00 1.643±1.19 0.792±0.00 1.805±0.00 0.239±0.00 2.002±0.11 0.656±0.16 1.321±0.00
ENST00000378166 N/A N/A N/A 0.860±0.00 N/A N/A 0.427±0.00 N/A N/A 2.092±0.00 1.093±0.00 N/A N/A N/A
ENST00000378168 N/A N/A N/A N/A 4.052±0.00 4.952±0.00 N/A 2.800±0.00 1.937±0.00 N/A N/A 9.583±0.00 N/A N/A
ENST00000378179 N/A N/A 1.326±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421587 1.391±0.00 2.477±0.00 0.394±0.00 1.510±1.15 1.276±0.54 1.454±0.10 0.586±0.00 1.115±0.52 0.656±0.04 1.287±0.26 0.278±0.16 2.441±0.98 0.761±0.10 0.768±0.43
ENST00000442742 2.351±0.00 N/A N/A 3.438±0.84 2.209±0.00 N/A 1.061±0.00 N/A N/A 1.716±0.00 1.038±0.00 6.721±0.00 0.895±0.22 1.416±0.00
ENST00000468986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.254±0.00 7.687±0.00 2.231±0.00
ENST00000472704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171657 ENST00000302548 0.056±0.00 N/A N/A 0.043±0.00 0.078±0.00 0.068±0.04 N/A 0.300±0.00 0.233±0.09 0.052±0.00 0.017±0.00 0.097±0.06 0.114±0.04 0.094±0.05
ENST00000497180 0.404±0.00 1.609±0.00 0.529±0.00 0.625±0.00 0.682±0.00 0.186±0.00 0.203±0.00 0.486±0.00 0.209±0.00 0.701±0.47 0.062±0.00 0.158±0.07 N/A 0.115±0.00
ENSG00000171659 ENST00000378138 0.586±0.00 1.260±0.00 N/A 0.419±0.00 3.799±0.00 0.368±0.00 0.419±0.00 1.997±1.33 0.245±0.00 N/A N/A N/A 1.927±0.00 0.491±0.00
ENST00000378142 2.758±0.00 1.749±0.00 0.831±0.00 1.775±0.50 4.286±0.67 0.870±0.00 1.698±1.14 0.881±0.00 1.861±1.11 0.657±0.19 0.280±0.00 1.635±0.97 5.089±2.40 1.615±0.00
ENST00000620846 1.526±0.00 N/A N/A 2.774±1.03 4.344±1.04 1.917±1.62 1.409±0.00 1.151±0.00 2.289±0.00 3.439±3.07 0.065±0.00 1.739±0.61 3.308±1.20 0.317±0.00
ENSG00000217624 ENST00000405276 0.016±0.00 0.103±0.00 0.122±0.00 0.137±0.03 0.250±0.20 0.047±0.00 0.085±0.05 0.039±0.02 0.254±0.24 0.161±0.00 0.015±0.00 0.526±0.51 N/A 0.021±0.01
ENSG00000229822 ENST00000451332 N/A 0.096±0.00 N/A 0.063±0.00 0.259±0.13 N/A 0.056±0.00 N/A N/A 1.944±0.00 N/A 0.136±0.06 N/A N/A
ENSG00000233033 ENST00000451126 N/A N/A N/A N/A N/A N/A N/A 8.031±0.00 2.715±0.00 4.288±0.00 N/A N/A N/A N/A
ENSG00000242559 ENST00000475761 0.242±0.00 0.190±0.00 N/A N/A 0.286±0.22 2.159±0.00 N/A N/A N/A N/A N/A 0.462±0.00 N/A 0.060±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031012 ENSMUST00000033321 1.735±0.34 0.521±0.09 2.979±0.40 5.462±0.00 1.370±0.29 2.692±0.40 0.540±0.16 1.260±0.23 0.926±0.47 1.221±0.34 0.824±0.18 3.614±1.34 0.727±0.36 0.174±0.05
ENSMUST00000115435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115436 1.230±0.13 N/A 0.822±0.00 N/A 0.624±0.24 N/A 0.554±0.15 0.463±0.07 0.212±0.06 1.771±0.00 0.527±0.15 0.724±0.04 N/A 0.087±0.00
ENSMUST00000115438 0.810±0.18 0.879±0.16 0.687±0.00 2.992±0.91 0.689±0.30 2.153±0.00 0.184±0.03 0.537±0.23 0.257±0.06 0.488±0.00 0.221±0.09 0.946±0.36 0.118±0.05 0.033±0.00
ENSMUST00000124710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128012 N/A N/A N/A 31.633±0.00 N/A N/A N/A N/A N/A N/A N/A 19.218±0.00 3.644±0.67 1.340±0.00
ENSMUST00000128095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.215±0.00 0.343±0.00
ENSMUST00000132240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152358 N/A 0.921±0.19 N/A N/A N/A 1.843±0.05 N/A N/A N/A 1.386±0.00 N/A 2.442±0.48 N/A 0.160±0.00
ENSMUST00000155989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156096 N/A N/A 1.521±0.00 1.375±0.00 0.650±0.18 N/A 0.290±0.00 0.517±0.14 0.262±0.17 1.583±0.70 0.435±0.21 1.911±0.99 0.146±0.05 0.059±0.04
ENSMUSG00000040229 ENSMUST00000041708 0.420±0.09 N/A 0.700±0.04 0.196±0.09 0.231±0.02 N/A 0.145±0.00 N/A 0.055±0.01 0.165±0.00 0.090±0.00 0.177±0.05 0.058±0.01 0.036±0.00
ENSMUST00000096492 1.092±0.39 0.235±0.07 0.612±0.36 0.329±0.15 1.008±0.29 0.328±0.12 0.273±0.08 0.170±0.09 0.081±0.05 0.401±0.10 0.142±0.09 0.491±0.24 0.104±0.10 0.109±0.07
ENSMUSG00000047678 ENSMUST00000053659 0.112±0.07 N/A 0.061±0.00 0.024±0.00 0.073±0.04 N/A 0.016±0.00 0.045±0.02 0.025±0.02 0.108±0.03 0.019±0.00 0.256±0.12 0.007±0.00 0.253±0.25

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