C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serpin peptidase inhibitor, clade D (heparin cofactor), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406799 SERPIND1-002 ENSG00000099937 9606 + 22:20779181-20787232 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartMuscleOvaryPlacentaENST00000406799
Transcript ID Bladder Brain Breast Colon Heart Muscle Ovary Placenta
ENST00000406799 0.055±0.00 0.985±0.00 0.267±0.11 0.026±0.00 0.059±0.02 0.025±0.00 0.077±0.00 0.098±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KR CIL_0003KR_0002 CGP 22:20707691-20859417
CIL_0003KQ CIL_0003KQ_0002 CGP 22:20773879-20891218

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004866 TAS endopeptidase inhibitor activity
GO:0004867 IBA serine-type endopeptidase inhibitor activity
GO:0005576 NAS extracellular region
GO:0005615 IEA extracellular space
GO:0006935 IEA chemotaxis
GO:0007596 IEA blood coagulation
GO:0008201 IEA heparin binding
GO:0010951 IBA negative regulation of endopeptidase activity
GO:0030162 IBA regulation of proteolysis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161034 Serpind1-002 protein_coding Mus_musculus 0 1347
ENSMUST00000023450 Serpind1-001 protein_coding Mus_musculus 0 1347

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