C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: neurexin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406859 NRXN1-202 ENSG00000179915 9606 - 2:50465443-50623616 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryENST00000406859
Transcript ID Liver Ovary
ENST00000406859 1.464±0.00 0.040±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161402 Nrxn1-011 protein_coding Mus_musculus 0 3579
ENSMUST00000174331 Nrxn1-015 protein_coding Mus_musculus 0 3443
ENSMUST00000160844 Nrxn1-001 protein_coding Mus_musculus 0 3443
ENSMUST00000161637 Nrxn1-004 processed_transcript Mus_musculus 0 3000
ENSMUST00000161102 Nrxn1-013 retained_intron Mus_musculus 0 3000
ENSMUST00000072671 Nrxn1-002 protein_coding Mus_musculus 0 3000
ENSMUST00000054059 Nrxn1-020 protein_coding Mus_musculus 0 3000
ENSMUST00000159778 Nrxn1-009 protein_coding Mus_musculus 0 3000
ENSMUST00000160800 Nrxn1-014 protein_coding Mus_musculus 0 3000
ENSDART00000111239 nrxn1a-202 protein_coding Danio_rerio 0 1354
ENSDART00000088178 nrxn1a-201 protein_coding Danio_rerio 0 1354
ENSDART00000093094 nrxn1a-001 protein_coding Danio_rerio 0 1354
ENSDART00000149547 nrxn1b-001 protein_coding Danio_rerio 0 780
ENSDART00000088179 nrxn3a-202 protein_coding Danio_rerio 0 728
ENSDART00000156928 nrxn3a-001 protein_coding Danio_rerio 0 728
ENSMUST00000177342 Nrxn1-018 protein_coding Mus_musculus 0 654
ENSDART00000090934 nrxn3b-202 protein_coding Danio_rerio 0 566
ENSDART00000127050 nrxn3b-203 protein_coding Danio_rerio 0 566
ENSDART00000090646 nrxn3b-201 protein_coding Danio_rerio 0 558
ENSDART00000149694 nrxn3b-001 protein_coding Danio_rerio 0 531
ENSMUST00000159419 Nrxn1-003 retained_intron Mus_musculus 0 499
ENSMUST00000160467 Nrxn1-006 retained_intron Mus_musculus 0 499
ENSMUST00000176118 Nrxn1-012 protein_coding Mus_musculus 0 473
ENSMUST00000162227 Nrxn1-008 retained_intron Mus_musculus 0 464

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