C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurexin 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000093094 nrxn1a-001 ENSDARG00000061647 7955 + 12:25854716-26143639 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000093094
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000093094 41.810±22.10 0.240±0.21 0.180±0.07 0.106±0.00 2.827±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0007155 IEA cell adhesion
GO:0007268 IEA synaptic transmission
GO:0007269 IEA neurotransmitter secretion
GO:0007416 IEA synapse assembly
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0046872 IEA metal ion binding
GO:0051965 IEA positive regulation of synapse assembly
GO:0090129 IEA positive regulation of synapse maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160844 Nrxn1-001 protein_coding Mus_musculus 0 1596
ENSMUST00000161402 Nrxn1-011 protein_coding Mus_musculus 0 1725
ENSMUST00000174331 Nrxn1-015 protein_coding Mus_musculus 0 1391
ENST00000265459 NRXN2-201 protein_coding Homo_sapiens 1e-33 150
ENST00000301894 NRXN2-003 protein_coding Homo_sapiens 8e-34 150
ENST00000377551 NRXN2-001 protein_coding Homo_sapiens 1e-33 150
ENST00000377559 NRXN2-002 protein_coding Homo_sapiens 1e-33 150
ENST00000401669 NRXN1-003 protein_coding Homo_sapiens 0 1589
ENST00000404971 NRXN1-002 protein_coding Homo_sapiens 0 1700
ENST00000406316 NRXN1-001 protein_coding Homo_sapiens 0 1386
ENST00000406859 NRXN1-202 protein_coding Homo_sapiens 0 1354
ENST00000409571 NRXN2-015 protein_coding Homo_sapiens 1e-33 150
ENST00000464307 NRXN2-005 retained_intron Homo_sapiens 7e-34 150
ENST00000475737 NRXN2-004 processed_transcript Homo_sapiens 1e-34 150

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