C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hypermethylated in cancer 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000407464 HIC2-003 ENSG00000169635 9606 + 22:21417404-21451463 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000407464
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000407464 1.322±0.00 0.938±0.00 0.245±0.14 0.419±0.29 0.413±0.34 0.250±0.23 1.217±0.00 0.449±0.00 0.786±0.00 0.147±0.08 2.433±1.76 6.758±2.05 4.671±1.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PT CIL_0008PT_0001 VISTA 22:21299079-21900013
CIL_0002X8 CIL_0002X8_0001 CGP 22:21383374-21451463

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 NAS DNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005886 IDA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0008022 IPI protein C-terminus binding
GO:0045892 NAS negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090190 Hic2-001 protein_coding Mus_musculus 0 1973
ENSMUST00000115698 Hic2-002 protein_coding Mus_musculus 0 1640

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