C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hypermethylated in cancer 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000407598 HIC2-002 ENSG00000169635 9606 + 22:21420636-21449434 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartKidneyMuscleOvaryTestisENST00000407598
Transcript ID Bladder Breast Heart Kidney Muscle Ovary Testis
ENST00000407598 0.188±0.00 0.228±0.00 0.071±0.00 0.305±0.00 0.201±0.00 0.573±0.00 1.309±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PT CIL_0008PT_0001 VISTA 22:21299079-21900013
CIL_0002X8 CIL_0002X8_0001 CGP 22:21383374-21451463

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 NAS DNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005886 IDA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0008022 IPI protein C-terminus binding
GO:0045892 NAS negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090190 Hic2-001 protein_coding Mus_musculus 0 1971
ENSMUST00000115698 Hic2-002 protein_coding Mus_musculus 0 1639

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