C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB, member of RAS oncogene family-like 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409121 RABL2A-014 ENSG00000144134 9606 + 2:113628328-113643392 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000409121
Transcript ID Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000409121 0.748±0.00 0.721±0.00 0.485±0.03 0.275±0.12 0.134±0.00 0.671±0.31 1.104±0.04 1.069±0.43 0.185±0.00 1.652±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023294 Rabl2-001 protein_coding Mus_musculus 0 747
ENSMUST00000165747 Rabl2-004 retained_intron Mus_musculus 0 479
ENSMUST00000172053 Rabl2-006 nonsense_mediated_decay Mus_musculus 0 333
ENSMUST00000094056 Rabl2-002 protein_coding Mus_musculus 0 272
ENSMUST00000171580 Rabl2-008 nonsense_mediated_decay Mus_musculus 0 270
ENSMUST00000172074 Rabl2-011 retained_intron Mus_musculus 0 270
ENSMUST00000169466 Rabl2-010 nonsense_mediated_decay Mus_musculus 0 268
ENSMUST00000163376 Rabl2-003 retained_intron Mus_musculus 0 219
ENSMUST00000170126 Rabl2-009 nonsense_mediated_decay Mus_musculus 0 219
ENSMUST00000171826 Rabl2-005 protein_coding Mus_musculus 0 193
ENSMUST00000171142 Rabl2-007 processed_transcript Mus_musculus 8e-27 126

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