C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409194 ATP5G3-002 ENSG00000154518 9606 - 2:175178067-175181710 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000409194
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000409194 3.267±0.00 17.048±0.00 1.855±0.00 17.090±0.00 24.533±0.00 13.953±0.00 3.396±0.00 2.854±0.00 45.212±0.00 34.423±18.90 65.176±40.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001H6 CIL_0001H6_0001 CGP 2:175072250-175184607
CIL_0007L2 CIL_0007L2_0001 UCNEbase 2:175103181-177219808
CIL_0001H5 CIL_0001H5_0001 CGP 2:175176258-176002839

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 NAS transporter activity
GO:0005753 TAS mitochondrial proton-transporting ATP synthase complex
GO:0008289 IEA lipid binding
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015986 IEA ATP synthesis coupled proton transport
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016021 IEA integral component of membrane
GO:0033177 IEA proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0045263 IEA proton-transporting ATP synthase complex, coupling factor F(o)

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018914 Atp5g3-001 protein_coding Mus_musculus 0 937
ENSMUST00000111996 Atp5g3-002 protein_coding Mus_musculus 0 935
ENSMUST00000142768 Atp5g3-004 processed_transcript Mus_musculus 0 540
ENSMUST00000131045 Atp5g3-005 processed_transcript Mus_musculus 0 424
ENSMUST00000155474 Atp5g3-003 processed_transcript Mus_musculus 0 233

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