C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NCK-associated protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409213 NCKAP5-002 ENSG00000176771 9606 - 2:132673049-133568463 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartLiverMuscleOvaryTestisENST00000409213
Transcript ID Bladder Brain Colon Heart Liver Muscle Ovary Testis
ENST00000409213 1.184±0.00 0.839±0.16 0.072±0.00 0.808±0.00 0.387±0.00 0.235±0.00 0.486±0.00 0.279±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001W8 CIL_0001W8_0001 CGP 2:132644853-133568463
CIL_0001J4 CIL_0001J4_0001 CGP 2:132671799-134454621

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112583 Nckap5-202 protein_coding Mus_musculus 0 704
ENSMUST00000094609 Nckap5-201 protein_coding Mus_musculus 0 702
ENSMUST00000161954 Nckap5-001 protein_coding Mus_musculus 0 520
ENSMUST00000162877 Nckap5-002 protein_coding Mus_musculus 0 518
ENSMUST00000057846 Nckap5-003 protein_coding Mus_musculus 0 457
ENSMUST00000162646 Nckap5-007 protein_coding Mus_musculus 0 449
ENSMUST00000160693 Nckap5-008 protein_coding Mus_musculus 0 446
ENSMUST00000162647 Nckap5-010 retained_intron Mus_musculus 0 191
ENSMUST00000162664 Nckap5-009 retained_intron Mus_musculus 0 191
ENSMUST00000159934 Nckap5-004 processed_transcript Mus_musculus 1e-35 156

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