C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NCK-associated protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409261 NCKAP5-001 ENSG00000176771 9606 - 2:132671799-133568460 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409261
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409261 0.068±0.00 0.126±0.00 1.040±0.00 0.820±0.00 0.305±0.09 0.043±0.00 0.513±0.00 0.767±0.00 0.065±0.00 3.315±0.57 0.010±0.00 0.170±0.07 0.404±0.24 0.561±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001W8 CIL_0001W8_0001 CGP 2:132644853-133568463
CIL_0001J4 CIL_0001J4_0001 CGP 2:132671799-134454621

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112583 Nckap5-202 protein_coding Mus_musculus 0 1626
ENSMUST00000161954 Nckap5-001 protein_coding Mus_musculus 0 1626
ENSMUST00000057846 Nckap5-003 protein_coding Mus_musculus 0 1472
ENSMUST00000094609 Nckap5-201 protein_coding Mus_musculus 0 702
ENSMUST00000162877 Nckap5-002 protein_coding Mus_musculus 0 518
ENSMUST00000162646 Nckap5-007 protein_coding Mus_musculus 0 449
ENSMUST00000160693 Nckap5-008 protein_coding Mus_musculus 0 446
ENSMUST00000159934 Nckap5-004 processed_transcript Mus_musculus 0 307
ENSMUST00000162647 Nckap5-010 retained_intron Mus_musculus 1.4013e-45 191
ENSMUST00000162664 Nckap5-009 retained_intron Mus_musculus 1.4013e-45 191

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