C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein L, 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409652 APOL6-001 ENSG00000221963 9606 + 22:35648395-35668409 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409652
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409652 21.234±0.00 6.490±0.00 1.727±0.00 1.218±0.56 17.482±9.19 5.246±0.07 2.105±0.43 8.405±3.73 5.315±0.56 7.293±0.87 0.949±0.46 5.137±2.65 3.797±0.89 1.971±1.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099W CIL_00099W_0001 VISTA 22:35286634-35891311
CIL_00094Q CIL_00094Q_0001 VISTA 22:35329925-35944605
CIL_0008TT CIL_0008TT_0001 VISTA 22:35449644-36050666
CIL_0003GQ CIL_0003GQ_0001 CGP 22:35606764-35668409

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0005737 IEA cytoplasm
GO:0006869 IEA lipid transport
GO:0008289 IEA lipid binding
GO:0042157 IEA lipoprotein metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102881 Plek-001 protein_coding Mus_musculus 0.0000004 62
ENSMUST00000184616 Atf7-002 protein_coding Mus_musculus 0.0001 55

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