C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: activating transcription factor 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184616 Atf7-002 ENSMUSG00000099083 10090 - 15:102528636-102625450 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000184616
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000184616 22.102±7.13 8.551±3.09 15.548±1.49 7.200±4.82 18.032±4.58 6.893±2.54 9.066±1.82 6.063±1.80 4.601±1.42 18.470±3.46 7.429±0.45 20.036±7.35 6.183±3.40 4.125±2.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B4 CIL_0009B4_0002 VISTA 15:102394217-102994945
CIL_00061S CIL_00061S_0002 CGP 15:102525946-102672352

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000077839 atf7b-201 protein_coding Danio_rerio 0 198
ENSDART00000104042 atf7b-202 protein_coding Danio_rerio 0 198
ENSDART00000136076 atf7b-001 protein_coding Danio_rerio 0 198
ENST00000317620 PROM2-201 protein_coding Homo_sapiens 0.0001 55
ENST00000317668 PROM2-001 protein_coding Homo_sapiens 0.0001 55
ENST00000324774 CAMKK2-001 protein_coding Homo_sapiens 0.00004 57
ENST00000392473 CAMKK2-002 protein_coding Homo_sapiens 0.00004 57
ENST00000409652 APOL6-001 protein_coding Homo_sapiens 0.0001 55
ENST00000420353 ATF7-001 protein_coding Homo_sapiens 0 2907
ENST00000431567 PROM2-005 nonsense_mediated_decay Homo_sapiens 0.0001 55
ENST00000456903 ATF7-006 protein_coding Homo_sapiens 0 2800
ENST00000487138 PROM2-003 retained_intron Homo_sapiens 0.0001 55
ENST00000541638 STOML1-001 protein_coding Homo_sapiens 0.0000008 62
ENST00000546661 ATF7-003 processed_transcript Homo_sapiens 0 1144
ENST00000548118 ATF7-009 protein_coding Homo_sapiens 0 453
ENST00000548446 ATF7-007 protein_coding Homo_sapiens 0 1786
ENST00000550373 ATF7-008 processed_transcript Homo_sapiens 0 189
ENST00000551087 ATF7-004 processed_transcript Homo_sapiens 0 438
ENST00000551480 ATF7-005 protein_coding Homo_sapiens 0 544
ENST00000565561 CRISPLD2-006 retained_intron Homo_sapiens 0.0000002 62
ENST00000588078 ATF7-011 protein_coding Homo_sapiens 0 453
ENST00000588232 ATF7-010 protein_coding Homo_sapiens 0 547
ENST00000589726 ATF7-013 retained_intron Homo_sapiens 0 215
ENST00000591397 ATF7-002 protein_coding Homo_sapiens 0 560
ENST00000591834 RP11-793H13.10-001 protein_coding Homo_sapiens 0 1801
ENST00000593995 FKRP-018 retained_intron Homo_sapiens 0.00001 58
ENST00000598271 FKRP-019 protein_coding Homo_sapiens 0.00001 58
ENST00000600681 FKRP-014 processed_transcript Homo_sapiens 0.00001 58
ENST00000600977 FKRP-006 processed_transcript Homo_sapiens 0.00001 58
ENST00000624767 CELP-003 processed_transcript Homo_sapiens 0.0001 55

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