C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409818 MPP4-011 ENSG00000082126 9606 - 2:201654837-201698669 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverLungMuscleENST00000409818
Transcript ID Adipose Adrenal Brain Breast Colon Liver Lung Muscle
ENST00000409818 0.013±0.00 0.162±0.00 0.037±0.00 0.041±0.00 0.029±0.00 0.025±0.00 0.103±0.00 0.008±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089O CIL_00089O_0001 VISTA 2:201132231-201734391
CIL_0009CR CIL_0009CR_0001 VISTA 2:201587932-202188948
CIL_00020O CIL_00020O_0001 CGP 2:201620184-201698694
CIL_0000JK CIL_0000JK_0002 CGP 2:201644870-201781189

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066374 Mpp4-201 protein_coding Mus_musculus 0 1031
ENSMUST00000078874 Mpp4-005 protein_coding Mus_musculus 0 1031
ENSMUST00000114275 Mpp4-001 protein_coding Mus_musculus 0 1022
ENSMUST00000191200 Mpp4-006 protein_coding Mus_musculus 0 1014
ENSMUST00000189743 Mpp4-007 retained_intron Mus_musculus 0 841
ENSMUST00000188494 Mpp4-003 retained_intron Mus_musculus 0 364
ENSMUST00000187825 Mpp4-009 processed_transcript Mus_musculus 0 364
ENSMUST00000189884 Mpp4-004 retained_intron Mus_musculus 0 326
ENSMUST00000186477 Mpp4-008 protein_coding Mus_musculus 0 318

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