C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000JK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076872-ENSDARG00000076924 CGP 7955 6:7839764-7932813
GeneTranscriptPositionBiotype
ENSDARG00000076872 (MPP4 (3 of 3))
membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) 		ENSDART00000045070 (MPP4 (3 of 3)-201) 7839964-7856382 protein_coding
ENSDART00000150894 (MPP4 (3 of 3)-003) 7848848-7856394 protein_coding
ENSDART00000151046 (MPP4 (3 of 3)-002) 7848367-7848873 processed_transcript
ENSDART00000151558 (MPP4 (3 of 3)-001) 7839764-7845493 protein_coding
ENSDART00000151749 (MPP4 (3 of 3)-004) 7853927-7859160 protein_coding
ENSDARG00000096401 (si:ch73-272h16.6)
si:ch73-272h16.6 		ENSDART00000150904 (si:ch73-272h16.6-001) 7845429-7852675 antisense
CIL_0000JK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000082126-ENSG00000003393 CGP 9606 2:201644870-201781189
GeneTranscriptPositionBiotype
ENSG00000003393 (ALS2)
amyotrophic lateral sclerosis 2 (juvenile) 		ENST00000264276 (ALS2-001) 201700554-201781189 protein_coding
ENST00000409632 (ALS2-009) 201761576-201780922 protein_coding
ENST00000410052 (ALS2-006) 201761675-201780951 protein_coding
ENST00000439495 (ALS2-005) 201701687-201744388 nonsense_mediated_decay
ENST00000462747 (ALS2-008) 201765383-201780911 processed_transcript
ENST00000467448 (ALS2-002) 201759457-201780956 protein_coding
ENST00000482789 (ALS2-003) 201741184-201780956 retained_intron
ENST00000482891 (ALS2-004) 201721990-201780956 retained_intron
ENST00000483703 (ALS2-010) 201728618-201738724 processed_transcript
ENST00000489440 (ALS2-012) 201716642-201726552 processed_transcript
ENST00000494017 (ALS2-011) 201726836-201733453 processed_transcript
ENST00000496244 (ALS2-007) 201761403-201780956 processed_transcript
ENSG00000082126 (MPP4)
membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) 		ENST00000315506 (MPP4-002) 201644870-201698694 protein_coding
ENST00000359962 (MPP4-201) 201644875-201698694 protein_coding
ENST00000396886 (MPP4-008) 201644875-201698057 protein_coding
ENST00000409143 (MPP4-007) 201645105-201698068 protein_coding
ENST00000409474 (MPP4-001) 201644870-201698694 protein_coding
ENST00000409818 (MPP4-011) 201654837-201698669 nonsense_mediated_decay
ENST00000428900 (MPP4-009) 201644897-201697996 protein_coding
ENST00000447335 (MPP4-010) 201645156-201694057 protein_coding
ENST00000483841 (MPP4-006) 201680065-201698631 retained_intron
ENST00000486212 (MPP4-004) 201665064-201698683 retained_intron
ENST00000602867 (MPP4-012) 201685935-201698633 protein_coding
ENST00000620095 (MPP4-202) 201644875-201698694 protein_coding
ENSG00000230799 (AC007279.2)
 ENST00000448547 (AC007279.2-001) 201762737-201763573 processed_pseudogene
CIL_0000JK_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000079550-ENSMUSG00000026024 CGP 10090 1:59120935-59237231
GeneTranscriptPositionBiotype
ENSMUSG00000026024 (Als2)
amyotrophic lateral sclerosis 2 (juvenile) 		ENSMUST00000027178 (Als2-001) 59162926-59237231 protein_coding
ENSMUST00000159166 (Als2-003) 59191609-59237231 retained_intron
ENSMUST00000160945 (Als2-004) 59215651-59237226 protein_coding
ENSMUST00000163058 (Als2-002) 59164058-59237093 protein_coding
ENSMUST00000188469 (Als2-005) 59216344-59219126 retained_intron
ENSMUSG00000097573 (G730003C15Rik)
RIKEN cDNA G730003C15 gene 		ENSMUST00000180570 (G730003C15Rik-201) 59119833-59122139 antisense
ENSMUST00000189096 (G730003C15Rik-001) 59119833-59122141 antisense
ENSMUSG00000099563 (RP24-89C18.2)
predicted gene, 19125 		ENSMUST00000188408 (RP24-89C18.2-001) 59155607-59156989 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JK_0001ENSDARG00000076872ENSDART00000045070ENSDART00000150894ENSDART00000151046ENSDART00000151558ENSDART00000151749ENSDARG00000096401ENSDART00000150904CIL_0000JK_0002ENSG00000003393ENST00000264276ENST00000409632ENST00000410052ENST00000439495ENST00000462747ENST00000467448ENST00000482789ENST00000482891ENST00000483703ENST00000489440ENST00000494017ENST00000496244ENSG00000082126ENST00000315506ENST00000359962ENST00000396886ENST00000409143ENST00000409474ENST00000409818ENST00000428900ENST00000447335ENST00000483841ENST00000486212ENST00000602867ENST00000620095ENSG00000230799ENST00000448547CIL_0000JK_0003ENSMUSG00000026024ENSMUST00000027178ENSMUST00000159166ENSMUST00000160945ENSMUST00000163058ENSMUST00000188469ENSMUSG00000097573ENSMUST00000180570ENSMUST00000189096ENSMUSG00000099563ENSMUST00000188408
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JK_0001ENSDARG00000076872ENSDART00000045070ENSDART00000151046ENSDART00000151558ENSDART00000151749ENSDARG00000096401ENSDART00000150904CIL_0000JK_0002ENSG00000003393ENST00000264276ENST00000439495ENST00000467448ENST00000482789ENST00000482891ENSG00000082126ENST00000315506ENST00000396886ENST00000409143ENST00000409818ENST00000428900ENST00000447335ENST00000483841ENST00000486212ENST00000602867ENSG00000230799ENST00000448547CIL_0000JK_0003ENSMUSG00000026024ENSMUST00000027178ENSMUST00000159166ENSMUSG00000097573ENSMUST00000180570ENSMUST00000189096ENSMUSG00000099563ENSMUST00000188408
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000076872 ENSDART00000045070 N/A N/A N/A 0.025±0.00 N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151046 N/A N/A N/A N/A N/A N/A 0.507±0.00 N/A N/A N/A 0.501±0.00 N/A N/A N/A
ENSDART00000151558 N/A N/A N/A 0.157±0.02 N/A N/A 0.080±0.02 N/A 0.039±0.00 N/A N/A N/A N/A N/A
ENSDART00000151749 N/A N/A N/A 0.228±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000096401 ENSDART00000150904 N/A N/A N/A 0.142±0.03 N/A N/A 0.249±0.02 N/A 0.072±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000003393 ENST00000264276 1.857±0.00 0.545±0.00 0.917±0.00 3.571±0.55 1.391±0.00 1.535±0.36 3.869±1.81 2.477±0.00 1.423±1.00 1.536±0.09 1.231±0.88 1.849±0.75 1.329±0.35 2.670±0.62
ENST00000409632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000410052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439495 N/A N/A N/A N/A 1.043±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467448 1.300±0.00 1.710±0.00 0.887±0.00 2.316±0.00 1.135±0.16 1.405±0.00 N/A N/A 1.765±0.29 1.356±0.00 N/A 1.057±0.08 0.953±0.29 1.952±0.61
ENST00000482789 N/A N/A N/A N/A 1.132±0.00 N/A 1.355±0.00 N/A N/A 1.522±0.00 N/A N/A N/A N/A
ENST00000482891 N/A N/A N/A N/A N/A N/A N/A 1.189±0.00 N/A N/A N/A 1.102±0.00 N/A N/A
ENST00000483703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000082126 ENST00000315506 N/A N/A N/A N/A 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000359962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396886 N/A N/A N/A 0.026±0.00 N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409143 0.023±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A
ENST00000409474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409818 0.013±0.00 0.162±0.00 N/A 0.037±0.00 0.041±0.00 0.029±0.00 N/A N/A 0.025±0.00 0.103±0.00 0.008±0.00 N/A N/A N/A
ENST00000428900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 N/A N/A
ENST00000447335 N/A N/A 0.029±0.00 N/A N/A N/A 0.013±0.00 0.093±0.00 N/A N/A N/A N/A 0.041±0.00 N/A
ENST00000483841 N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A 0.038±0.00 0.053±0.00 N/A N/A N/A N/A
ENST00000486212 N/A 0.026±0.00 N/A 0.022±0.00 0.072±0.05 0.108±0.00 0.044±0.00 N/A 0.083±0.00 0.072±0.00 0.038±0.00 0.067±0.05 0.022±0.00 N/A
ENST00000602867 0.064±0.00 N/A 0.872±0.00 N/A 0.212±0.00 N/A N/A N/A 0.161±0.00 N/A N/A N/A N/A N/A
ENST00000620095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230799 ENST00000448547 N/A 0.305±0.00 0.227±0.00 N/A 0.056±0.00 0.350±0.00 N/A 0.685±0.00 0.237±0.00 0.592±0.00 N/A 0.311±0.34 0.104±0.00 0.153±0.13
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026024 ENSMUST00000027178 4.366±0.61 1.672±0.32 3.908±0.14 8.591±1.01 3.081±0.49 1.151±0.43 1.720±0.14 6.271±0.68 9.761±4.92 3.430±0.13 4.668±0.30 3.301±1.29 10.736±3.12 3.370±0.64
ENSMUST00000159166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.350±0.00 N/A N/A
ENSMUST00000160945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097573 ENSMUST00000180570 N/A 1.538±0.66 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.405±0.68
ENSMUST00000189096 N/A 1.062±0.17 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000099563 ENSMUST00000188408 0.025±0.00 N/A 0.012±0.00 0.020±0.01 N/A N/A N/A 0.085±0.05 0.069±0.04 0.052±0.00 N/A 0.023±0.01 0.028±0.02 0.023±0.00

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