C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | T-box, brain, 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000410035  |
TBR1-002 |
ENSG00000136535 |
9606 | + |
2:161417895-161424286  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008JH | CIL_0008JH_0001 | VISTA | 2:160938384-161538940 |
| CIL_0005L1 | CIL_0005L1_0001 | CGP | 2:161308038-161425870 |
| CIL_0003AH | CIL_0003AH_0001 | CGP | 2:161416094-161985282 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0005634 | IEA | nucleus |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0007420 | TAS | brain development |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000102737
|
Tbr1-002 | protein_coding | Mus_musculus | 0 | 1897 |
|
ENSMUST00000048934
|
Tbr1-001 | protein_coding | Mus_musculus | 0 | 1849 |
|
ENSMUST00000131538
|
Tbr1-003 | processed_transcript | Mus_musculus | 0 | 848 |
