C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005L1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115233-ENSG00000136535 CGP 9606 2:161308038-161425870
GeneTranscriptPositionBiotype
ENSG00000115233 (PSMD14)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 		ENST00000409682 (PSMD14-001) 161308038-161411717 protein_coding
ENST00000437630 (PSMD14-002) 161308600-161370119 protein_coding
ENST00000477232 (PSMD14-005) 161381360-161411715 retained_intron
ENST00000478123 (PSMD14-003) 161308461-161319022 retained_intron
ENST00000492908 (PSMD14-006) 161407528-161411715 retained_intron
ENSG00000136535 (TBR1)
T-box, brain, 1 		ENST00000389554 (TBR1-001) 161416094-161425870 protein_coding
ENST00000410035 (TBR1-002) 161417895-161424286 protein_coding
ENST00000411412 (TBR1-006) 161417779-161423776 protein_coding
ENST00000463544 (TBR1-005) 161416331-161423885 retained_intron
ENST00000477804 (TBR1-003) 161419210-161423685 processed_transcript
ENST00000489530 (TBR1-004) 161419511-161423455 processed_transcript
ENSG00000144290 (SLC4A10)
solute carrier family 4, sodium bicarbonate transporter, member 10 		ENST00000272716 (SLC4A10-009) 161624426-161983245 protein_coding
ENST00000375514 (SLC4A10-201) 161624335-161985275 protein_coding
ENST00000415876 (SLC4A10-001) 161624338-161985282 protein_coding
ENST00000421911 (SLC4A10-010) 161624461-161983359 protein_coding
ENST00000446228 (SLC4A10-005) 161624461-161983359 nonsense_mediated_decay
ENST00000446997 (SLC4A10-004) 161624426-161985253 protein_coding
ENST00000461456 (SLC4A10-003) 161624418-161873921 processed_transcript
ENST00000481721 (SLC4A10-006) 161624435-161839876 processed_transcript
ENST00000482861 (SLC4A10-007) 161424332-161771035 processed_transcript
ENST00000493021 (SLC4A10-002) 161624400-161901160 processed_transcript
ENST00000605990 (SLC4A10-008) 161424373-161624566 processed_transcript
ENST00000606386 (SLC4A10-011) 161427453-161651290 processed_transcript
ENSG00000224076 (AC009487.4)
 ENST00000437683 (AC009487.4-001) 161422659-161423577 antisense
ENST00000444164 (AC009487.4-002) 161422659-161423135 antisense
ENSG00000232320 (AC009299.5)
 ENST00000482477 (AC009299.5-001) 161340816-161341326 processed_pseudogene
ENSG00000271924 (5S_rRNA)
5S ribosomal RNA 		ENST00000605921 (5S_rRNA.1-211) 161409554-161409670 rRNA
CIL_0005L1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026914-ENSMUSG00000035033 CGP 10090 2:61711694-61814114
GeneTranscriptPositionBiotype
ENSMUSG00000026914 (Psmd14)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 		ENSMUST00000028278 (Psmd14-001) 61711694-61800376 protein_coding
ENSMUST00000125388 (Psmd14-008) 61776578-61800074 processed_transcript
ENSMUST00000134658 (Psmd14-006) 61715823-61751053 processed_transcript
ENSMUST00000135265 (Psmd14-005) 61711742-61720851 processed_transcript
ENSMUST00000139475 (Psmd14-002) 61711780-61725708 processed_transcript
ENSMUST00000146051 (Psmd14-004) 61711760-61764908 processed_transcript
ENSMUST00000153683 (Psmd14-003) 61711791-61761380 processed_transcript
ENSMUST00000154627 (Psmd14-007) 61765386-61800053 processed_transcript
ENSMUSG00000035033 (Tbr1)
T-box brain gene 1 		ENSMUST00000048934 (Tbr1-001) 61804453-61814114 protein_coding
ENSMUST00000102737 (Tbr1-002) 61806262-61812531 protein_coding
ENSMUST00000131538 (Tbr1-003) 61806273-61811801 processed_transcript
ENSMUST00000136867 (Tbr1-004) 61802930-61804558 processed_transcript
ENSMUSG00000087794 (Gm25966)
predicted gene, 25966 		ENSMUST00000157169 (Gm25966-201) 61798180-61798296 rRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005L1_0001ENSG00000115233ENST00000409682ENST00000437630ENST00000477232ENST00000478123ENST00000492908ENSG00000136535ENST00000389554ENST00000410035ENST00000411412ENST00000463544ENST00000477804ENST00000489530ENSG00000144290ENST00000272716ENST00000375514ENST00000415876ENST00000421911ENST00000446228ENST00000446997ENST00000461456ENST00000481721ENST00000482861ENST00000493021ENST00000605990ENST00000606386ENSG00000224076ENST00000437683ENST00000444164ENSG00000232320ENST00000482477ENSG00000271924ENST00000605921CIL_0005L1_0002ENSMUSG00000026914ENSMUST00000028278ENSMUST00000125388ENSMUST00000134658ENSMUST00000135265ENSMUST00000139475ENSMUST00000146051ENSMUST00000153683ENSMUST00000154627ENSMUSG00000035033ENSMUST00000048934ENSMUST00000102737ENSMUST00000131538ENSMUST00000136867ENSMUSG00000087794ENSMUST00000157169
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005L1_0001ENSG00000115233ENST00000409682ENST00000477232ENSG00000136535ENST00000389554ENST00000411412ENST00000463544ENSG00000144290ENST00000272716ENST00000375514ENST00000415876ENST00000421911ENST00000446228ENST00000446997ENST00000461456ENST00000606386ENSG00000224076ENST00000437683ENSG00000232320ENST00000482477ENSG00000271924ENST00000605921CIL_0005L1_0002ENSMUSG00000026914ENSMUST00000028278ENSMUST00000125388ENSMUST00000146051ENSMUST00000154627ENSMUSG00000035033ENSMUST00000048934ENSMUST00000102737ENSMUST00000136867ENSMUSG00000087794ENSMUST00000157169
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115233 ENST00000409682 9.286±0.00 9.936±0.00 2.209±0.00 11.821±4.60 5.971±2.79 10.363±4.67 10.049±4.50 5.547±0.45 13.974±6.99 3.742±0.83 7.526±3.02 14.509±3.88 41.186±32.04 34.018±0.00
ENST00000437630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477232 N/A N/A 0.265±0.00 N/A 0.972±0.00 0.806±0.00 N/A N/A 0.569±0.00 0.686±0.00 N/A 1.107±0.00 N/A N/A
ENST00000478123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000136535 ENST00000389554 N/A N/A N/A 33.345±0.00 N/A N/A N/A 0.019±0.00 N/A 0.048±0.00 0.010±0.00 N/A N/A N/A
ENST00000410035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000411412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.272±0.00 N/A N/A
ENST00000463544 0.010±0.00 N/A N/A N/A 0.034±0.02 N/A 0.002±0.00 N/A N/A 0.003±0.00 N/A N/A 0.006±0.00 N/A
ENST00000477804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144290 ENST00000272716 0.012±0.00 N/A 0.029±0.00 14.834±0.00 0.346±0.00 N/A 0.033±0.00 0.135±0.00 0.040±0.00 N/A N/A 0.013±0.01 0.011±0.00 0.319±0.00
ENST00000375514 N/A N/A N/A 7.319±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415876 N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A 0.033±0.00 N/A N/A 0.002±0.00 0.009±0.01 N/A
ENST00000421911 0.009±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A
ENST00000446228 N/A N/A N/A N/A 0.019±0.00 0.344±0.00 N/A N/A N/A N/A N/A N/A N/A 0.243±0.00
ENST00000446997 N/A 0.118±0.00 N/A 11.411±1.05 N/A 0.260±0.00 0.003±0.00 N/A 0.079±0.00 N/A N/A 0.016±0.01 0.022±0.00 N/A
ENST00000461456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.247±0.00 N/A N/A
ENST00000481721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606386 N/A N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000224076 ENST00000437683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.586±0.28
ENST00000444164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000232320 ENST00000482477 N/A N/A N/A N/A 0.120±0.00 N/A 0.367±0.00 0.174±0.00 2.591±0.00 0.122±0.00 N/A 2.525±0.00 N/A N/A
ENSG00000271924 ENST00000605921 1.114±0.00 N/A N/A N/A 1.161±0.00 N/A N/A N/A 0.310±0.00 N/A N/A N/A N/A 0.864±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026914 ENSMUST00000028278 18.099±0.41 4.761±0.83 21.559±2.19 36.905±3.81 13.376±4.32 6.436±1.78 12.820±0.27 12.756±1.61 26.907±18.50 11.234±2.05 24.028±0.92 14.790±12.79 38.263±8.68 9.728±1.86
ENSMUST00000125388 N/A N/A N/A 258.543±0.00 N/A N/A N/A N/A N/A N/A N/A 100.513±121.15 458.146±191.63 102.028±0.00
ENSMUST00000134658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146051 N/A 1.772±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.810±0.16 N/A N/A
ENSMUSG00000035033 ENSMUST00000048934 0.011±0.00 0.034±0.03 0.015±0.00 12.576±7.78 0.010±0.00 N/A N/A 0.014±0.01 0.020±0.02 0.029±0.00 0.012±0.00 0.026±0.01 0.026±0.02 0.109±0.06
ENSMUST00000102737 0.035±0.00 0.013±0.00 N/A N/A 0.055±0.02 0.027±0.01 N/A N/A N/A 0.023±0.01 N/A 0.083±0.05 N/A 0.370±0.00
ENSMUST00000131538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136867 N/A N/A N/A N/A 0.094±0.00 N/A N/A 0.024±0.00 0.009±0.00 N/A N/A N/A 0.032±0.00 N/A
ENSMUSG00000087794 ENSMUST00000157169 N/A N/A N/A 35.587±0.00 N/A N/A N/A N/A 21.349±7.03 N/A N/A 1278.901±1244.29 44.504±0.00 N/A

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