C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thyroid hormone receptor associated protein 3 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000411753 THRAP3P1-001 ENSG00000227339 9606 + 3:31452832-31455894 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungMuscleTestisENST00000411753
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Muscle Testis
ENST00000411753 0.032±0.00 0.006±0.00 0.019±0.00 0.018±0.00 0.007±0.00 0.006±0.00 0.009±0.00 0.041±0.00 0.019±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106142 Thrap3-004 protein_coding Mus_musculus 0 2002
ENSMUST00000080919 Thrap3-001 protein_coding Mus_musculus 0 2002
ENSMUST00000119454 Gm15204-001 processed_pseudogene Mus_musculus 0 1783
ENSMUST00000121016 Gm5898-001 processed_pseudogene Mus_musculus 0 1120
ENSMUST00000151728 Thrap3-003 retained_intron Mus_musculus 0 1072
ENSMUST00000175985 Gm20706-001 processed_pseudogene Mus_musculus 0 1013
ENSMUST00000163459 Thrap3-015 protein_coding Mus_musculus 0 424
ENSMUST00000163176 Thrap3-014 nonsense_mediated_decay Mus_musculus 0 327
ENSMUST00000163306 Thrap3-017 protein_coding Mus_musculus 0 315
ENSMUST00000123008 Thrap3-010 nonsense_mediated_decay Mus_musculus 0 272
ENSMUST00000136157 Thrap3-007 protein_coding Mus_musculus 0 195

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