C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: barrier to autointegration factor 1 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000412556 BANF1P3-001 ENSG00000237758 9606 - 2:230725143-230725403 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartMuscleOvaryENST00000412556
Transcript ID Adipose Adrenal Brain Breast Colon Heart Muscle Ovary
ENST00000412556 0.270±0.00 0.193±0.00 0.549±0.00 0.106±0.00 0.094±0.00 0.187±0.00 0.088±0.00 0.473±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004KY CIL_0004KY_0002 CGP 2:230712845-230879248

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170010 Banf1-202 protein_coding Mus_musculus 0 339
ENSMUST00000025762 Banf1-201 protein_coding Mus_musculus 0 339
ENSMUST00000119106 Gm5393-001 processed_pseudogene Mus_musculus 0 261

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