C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peroxisome proliferator-activated receptor gamma, coactivator-related 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413464 PPRC1-201 ENSG00000148840 9606 + 10:102132994-102150331 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000413464
Transcript ID Adrenal Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000413464 4.686±0.00 2.042±1.08 1.162±0.00 1.121±0.66 2.177±0.00 0.831±0.00 2.237±1.91 3.024±1.56 0.829±0.00 1.250±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058F CIL_00058F_0001 CGP 10:102107560-102150331
CIL_0005WF CIL_0005WF_0001 CGP 10:102132994-102163871

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005634 IDA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111899 Pprc1-001 protein_coding Mus_musculus 0 1437
ENSMUST00000062322 Pprc1-002 protein_coding Mus_musculus 0 1367
ENSMUST00000099392 Pprc1-003 protein_coding Mus_musculus 0 1328
ENSMUST00000153111 Pprc1-004 retained_intron Mus_musculus 0 776
ENSMUST00000126127 Pprc1-009 protein_coding Mus_musculus 0 507
ENSMUST00000135327 Pprc1-006 protein_coding Mus_musculus 0 431
ENSMUST00000150158 Pprc1-007 protein_coding Mus_musculus 0 374
ENSMUST00000146882 Pprc1-012 retained_intron Mus_musculus 0 313

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