C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413639 AC090945.1-001 ENSG00000224728 9606 + 3:15878047-15879571 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000413639
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000413639 0.040±0.00 0.029±0.00 0.368±0.00 0.255±0.12 0.182±0.17 0.155±0.14 0.013±0.00 0.077±0.00 0.154±0.00 0.037±0.00 0.200±0.00 0.246±0.14 0.037±0.01 0.354±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005A7 CIL_0005A7_0001 CGP 3:15667236-16231992

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162099 Impdh1-002 protein_coding Mus_musculus 0 1574
ENSMUST00000159124 Impdh1-003 protein_coding Mus_musculus 0 1574
ENSMUST00000078155 Impdh1-001 protein_coding Mus_musculus 0 1574
ENSMUST00000162739 Impdh1-004 protein_coding Mus_musculus 0 1487
ENSMUST00000160878 Impdh1-005 protein_coding Mus_musculus 0 1225
ENSMUST00000161654 Impdh1-008 retained_intron Mus_musculus 0 512
ENSMUST00000162215 Impdh1-007 protein_coding Mus_musculus 0 488
ENSMUST00000160749 Impdh1-006 protein_coding Mus_musculus 0 270
ENSMUST00000160613 Impdh1-009 retained_intron Mus_musculus 0 263

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