C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413658 ZNF3-006 ENSG00000166526 9606 - 7:100064033-100081727 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000413658
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000413658 3.871±0.00 5.426±0.00 2.953±1.03 6.387±0.00 3.689±0.13 1.787±1.07 5.172±3.44 2.343±0.00 4.943±0.00 8.705±0.62 4.399±0.14 9.227±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0001 VISTA 7:99696610-100298804
CIL_0002F6 CIL_0002F6_0001 CGP 7:100015572-100065038
CIL_0005LO CIL_0005LO_0001 CGP 7:100049774-100082548
CIL_0002GB CIL_0002GB_0001 CGP 7:100064033-100092200

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110959 Zscan21-005 protein_coding Mus_musculus 0 628
ENSMUST00000110960 Zscan21-002 protein_coding Mus_musculus 0 628
ENSMUST00000080732 Zscan21-004 protein_coding Mus_musculus 0 628
ENSMUST00000110961 Zscan21-001 protein_coding Mus_musculus 0 628
ENSMUST00000062350 Zscan21-003 protein_coding Mus_musculus 0 628
ENSMUST00000049393 Zfp113-001 protein_coding Mus_musculus 0 294
ENSMUST00000165640 Zfp113-201 protein_coding Mus_musculus 0 291
ENSMUST00000144786 Zfp113-003 processed_transcript Mus_musculus 0 291

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