C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413694 CTA-253N17.1-001 ENSG00000231084 9606 - 1:185171335-185171710 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000413694
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000413694 0.695±0.00 0.995±0.00 0.365±0.00 0.404±0.00 0.311±0.27 0.868±0.00 1.172±0.00 0.766±0.00 0.665±0.31 1.151±1.04 1.638±0.00 0.772±0.60 0.285±0.18 0.429±0.33

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000188151 Rpl22-201 protein_coding Mus_musculus 0 237
ENSMUST00000139685 Rpl22-002 protein_coding Mus_musculus 0 237
ENSMUST00000103191 Rpl22-001 protein_coding Mus_musculus 0 237
ENSMUST00000142735 Rpl22-003 processed_transcript Mus_musculus 0 237
ENSMUST00000121451 Gm12005-001 processed_pseudogene Mus_musculus 8.40779e-45 183
ENSMUST00000118652 Rpl22-ps1-001 processed_pseudogene Mus_musculus 9.94922e-44 180
ENSMUST00000127659 Rpl22-005 processed_transcript Mus_musculus 1.99993e-41 172
ENSMUST00000180176 Gm9457-201 processed_pseudogene Mus_musculus 1e-38 163
ENSMUST00000126519 Rpl22-004 processed_transcript Mus_musculus 4e-33 145
ENSMUST00000156445 Rpl22-007 processed_transcript Mus_musculus 6e-16 88

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