C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L22, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118652 Rpl22-ps1-001 ENSMUSG00000080877 10090 - X:8038611-8038996 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainKidneyLiverOvaryPlacentaENSMUST00000118652
Transcript ID Bladder Brain Kidney Liver Ovary Placenta
ENSMUST00000118652 0.267±0.00 0.038±0.00 0.186±0.00 0.210±0.28 0.468±0.23 0.135±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000079984 rpl22l1-001 protein_coding Danio_rerio 0.0000000000004 79
ENSDART00000136871 rpl22l1-002 nonsense_mediated_decay Danio_rerio 0.000000003 66
ENST00000234875 RPL22-001 protein_coding Homo_sapiens 0 363
ENST00000392735 RPL22P19-001 transcribed_processed_pseudogene Homo_sapiens 0 257
ENST00000395439 RPL22P22-001 processed_pseudogene Homo_sapiens 0 228
ENST00000401483 AC114776.1-001 processed_pseudogene Homo_sapiens 0 255
ENST00000413694 CTA-253N17.1-001 processed_pseudogene Homo_sapiens 9.94922e-44 180
ENST00000418623 RP11-641D5.1-001 processed_pseudogene Homo_sapiens 0 283
ENST00000419150 RP11-439A17.5-001 processed_pseudogene Homo_sapiens 0 219
ENST00000422106 RPL22P5-001 processed_pseudogene Homo_sapiens 0 213
ENST00000430042 RP11-38J22.2-001 processed_pseudogene Homo_sapiens 0 213
ENST00000434894 RPL22P11-001 processed_pseudogene Homo_sapiens 0 257
ENST00000438729 RP11-753C18.8-001 processed_pseudogene Homo_sapiens 0 261
ENST00000445689 RP11-430L17.1-001 processed_pseudogene Homo_sapiens 0 283
ENST00000462296 RPL22-008 protein_coding Homo_sapiens 0 252
ENST00000465335 RPL22-006 protein_coding Homo_sapiens 0 246
ENST00000465387 RPL22-005 protein_coding Homo_sapiens 0 333
ENST00000469811 RP11-488C13.1-001 processed_pseudogene Homo_sapiens 0 340
ENST00000471204 RPL22-007 protein_coding Homo_sapiens 0 344
ENST00000480427 RPL22P19-002 processed_transcript Homo_sapiens 0 270
ENST00000480661 RPL22-003 retained_intron Homo_sapiens 0 348
ENST00000484532 RPL22-004 protein_coding Homo_sapiens 0 248
ENST00000497965 RPL22-002 protein_coding Homo_sapiens 0 348

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