C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: septin 7 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413875 SEPT7P2-006 ENSG00000214765 9606 - 7:45727827-45748664 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000413875
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000413875 0.339±0.00 0.943±0.00 1.533±0.54 0.481±0.00 1.043±0.63 0.318±0.00 0.729±0.26 0.704±0.00 0.418±0.00 1.154±0.00 2.436±0.75 1.210±0.69 2.015±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WT CIL_0008WT_0001 VISTA 7:45262733-45867007
CIL_00072L CIL_00072L_0002 CGP 7:45574140-45893668

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165594 Sept7-202 protein_coding Mus_musculus 0 608
ENSMUST00000115272 Sept7-201 protein_coding Mus_musculus 0 608
ENSDART00000074575 SEPT7 (1 of 2)-201 protein_coding Danio_rerio 0 257
ENSDART00000148631 SEPT7 (1 of 2)-001 protein_coding Danio_rerio 0 257
ENSDART00000150132 SEPT7 (1 of 2)-002 protein_coding Danio_rerio 9.99995e-41 171
ENSDART00000149771 SEPT7 (1 of 2)-003 retained_intron Danio_rerio 8e-23 111

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