C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414406 RP11-405A12.1-001 ENSG00000256849 9606 + 12:19941521-19943018 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000414406
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000414406 0.079±0.00 0.110±0.00 0.169±0.09 0.151±0.04 0.181±0.04 0.139±0.00 0.137±0.00 0.058±0.00 0.052±0.00 0.142±0.00 0.035±0.00 0.024±0.00 0.135±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000151287 Tcp1-001 protein_coding Mus_musculus 0 1679
ENSMUST00000089024 Tcp1-003 protein_coding Mus_musculus 0 1679
ENSMUST00000129632 Tcp1-002 retained_intron Mus_musculus 0 1382
ENSMUST00000120941 Tcp1-ps1-001 processed_pseudogene Mus_musculus 0 990
ENSMUST00000138709 Tcp1-010 retained_intron Mus_musculus 0 623
ENSMUST00000133003 Tcp1-007 retained_intron Mus_musculus 0 420
ENSMUST00000151715 Tcp1-006 retained_intron Mus_musculus 0 302
ENSMUST00000143961 Tcp1-004 protein_coding Mus_musculus 0 198
ENSMUST00000147724 Tcp1-005 processed_transcript Mus_musculus 7e-21 106

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