C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415161 AC068535.5-001 ENSG00000225669 9606 + 2:104678223-104678673 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000415161
Transcript ID Colon
ENST00000415161 0.037±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004IW CIL_0004IW_0002 CGP 2:102736908-104860471
CIL_0007JQ CIL_0007JQ_0001 UCNEbase 2:102922366-105081592
CIL_0008G0 CIL_0008G0_0001 VISTA 2:104116035-104717987
CIL_00091Z CIL_00091Z_0001 VISTA 2:104127824-104731054
CIL_0008P4 CIL_0008P4_0001 VISTA 2:104131169-104732340
CIL_0007T8 CIL_0007T8_0001 VISTA 2:104216357-104817372
CIL_0007ZQ CIL_0007ZQ_0001 VISTA 2:104271403-104872401
CIL_0008TY CIL_0008TY_0001 VISTA 2:104337637-104939940
CIL_0008JA CIL_0008JA_0001 VISTA 2:104383886-104985199
CIL_0008IN CIL_0008IN_0001 VISTA 2:104401122-105003398
CIL_0008O2 CIL_0008O2_0001 VISTA 2:104536515-105137711
CIL_0008KZ CIL_0008KZ_0001 VISTA 2:104548528-105151080
CIL_000902 CIL_000902_0001 VISTA 2:104600279-105202032

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117773 Gm15215-001 processed_pseudogene Mus_musculus 5e-28 128

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