C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein kinase D1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415220 PRKD1-002 ENSG00000184304 9606 - 14:29576942-29927642 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartLiverLungOvaryPlacentaTestisENST00000415220
Transcript ID Adipose Brain Heart Liver Lung Ovary Placenta Testis
ENST00000415220 0.394±0.00 0.866±0.23 0.205±0.00 1.359±0.00 0.695±0.00 0.175±0.02 0.610±0.35 4.263±1.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007XL CIL_0007XL_0001 VISTA 14:28974168-29576675
CIL_00099Q CIL_00099Q_0001 VISTA 14:29088724-29691342
CIL_0008M6 CIL_0008M6_0001 VISTA 14:29091323-29693142
CIL_00094H CIL_00094H_0001 VISTA 14:29124991-29726376
CIL_0008VR CIL_0008VR_0001 VISTA 14:29142114-29743308
CIL_00092M CIL_00092M_0001 VISTA 14:29158278-29759612
CIL_00095N CIL_00095N_0001 VISTA 14:29191285-29792799
CIL_0008C7 CIL_0008C7_0001 VISTA 14:29227965-29829685
CIL_0005EN CIL_0005EN_0001 CGP 14:29576479-30620063

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004697 IEA protein kinase C activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006468 IEA protein phosphorylation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0035556 IEA intracellular signal transduction
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002765 Prkd1-201 protein_coding Mus_musculus 0 3753

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