C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tripartite motif containing 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416464 TRIM16-002 ENSG00000221926 9606 - 17:15627960-15684299 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverOvaryENST00000416464
Transcript ID Brain Colon Liver Ovary
ENST00000416464 1.114±0.44 0.428±0.00 0.098±0.00 0.456±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QF CIL_0008QF_0001 VISTA 17:15144744-15748248

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108703 Trim16-002 protein_coding Mus_musculus 0 1219
ENSMUST00000055006 Trim16-001 protein_coding Mus_musculus 0 1219
ENSMUST00000128623 Trim16-005 processed_transcript Mus_musculus 0 1133
ENSMUST00000072639 Trim16-004 protein_coding Mus_musculus 0 985

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