C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: biotinidase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417015 BTD-006 ENSG00000169814 9606 + 3:15601387-15635456 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungENST00000417015
Transcript ID Lung
ENST00000417015 2.693±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AM CIL_0005AM_0001 CGP 3:15450133-15601831
CIL_0005AL CIL_0005AL_0001 CGP 3:15560704-15645822
CIL_0005A8 CIL_0005A8_0001 CGP 3:15601341-15859771

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155210 Hacl1-007 retained_intron Mus_musculus 9e-16 88
ENSMUST00000134626 Hacl1-004 nonsense_mediated_decay Mus_musculus 9e-16 88
ENSMUST00000022437 Hacl1-001 protein_coding Mus_musculus 9e-16 88
ENSMUST00000156431 Hacl1-002 nonsense_mediated_decay Mus_musculus 9e-16 88
ENSMUST00000156189 Hacl1-008 retained_intron Mus_musculus 0.00000000000001 84
ENSMUST00000127204 Hacl1-005 protein_coding Mus_musculus 0.00000000000001 84
ENSMUST00000171414 Hacl1-013 nonsense_mediated_decay Mus_musculus 0.000000000002 77
ENSMUST00000165955 Hacl1-012 nonsense_mediated_decay Mus_musculus 0.000000000002 77
ENSMUST00000167066 Hacl1-011 protein_coding Mus_musculus 0.000000000002 77
ENSMUST00000167175 Hacl1-014 nonsense_mediated_decay Mus_musculus 0.000000000002 77

Loading