C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7 pseudogene 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417407 RPL7P10-001 ENSG00000229752 9606 - 1:81098267-81099005 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000417407
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000417407 0.063±0.00 0.129±0.00 0.048±0.00 0.109±0.00 0.088±0.00 0.015±0.00 0.048±0.00 0.118±0.00 0.057±0.00 0.064±0.03 0.024±0.00 0.088±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00003A CIL_00003A_0002 CGP 1:78889764-81992436

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058437 Rpl7-001 protein_coding Mus_musculus 0 693
ENSMUST00000119853 Gm12174-001 processed_pseudogene Mus_musculus 0 682
ENSMUST00000027054 Gm5045-201 processed_pseudogene Mus_musculus 0 660
ENSMUST00000118173 Gm6274-001 processed_pseudogene Mus_musculus 0 632
ENSMUST00000148424 1700073E17Rik-001 transcribed_processed_pseudogene Mus_musculus 0 496
ENSMUST00000152419 1700073E17Rik-002 processed_transcript Mus_musculus 0 496
ENSMUST00000141217 Rpl7-002 retained_intron Mus_musculus 0 435
ENSMUST00000136180 1700073E17Rik-004 processed_transcript Mus_musculus 0 425
ENSMUST00000151017 Rpl7-005 retained_intron Mus_musculus 0 228
ENSMUST00000140597 Rpl7-006 processed_transcript Mus_musculus 0 228

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