C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chondroadherin-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417999 CHADL-002 ENSG00000100399 9606 - 22:41229510-41239621 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENST00000417999
Transcript ID Heart
ENST00000417999 4.318±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RK CIL_0006RK_0001 CGP 22:41091786-41231271
CIL_0000VA CIL_0000VA_0002 CGP 22:41205205-41240934
CIL_0000V9 CIL_0000V9_0002 CGP 22:41229510-41286251

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072910 Chadl-001 protein_coding Mus_musculus 0 1881
ENSMUST00000173898 Chadl-002 nonsense_mediated_decay Mus_musculus 0 680

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