C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: thyroid hormone receptor interactor 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418123 TRIP12-016 ENSG00000153827 9606 - 2:229768616-229778465 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000418123
Transcript ID Ovary Placenta Testis
ENST00000418123 34.457±0.00 41.642±0.00 191.930±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087W CIL_00087W_0001 VISTA 2:229259676-229860905
CIL_00076T CIL_00076T_0001 CGP 2:229357629-229923239
CIL_00076Q CIL_00076Q_0001 CGP 2:229763838-230013109

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027421 Trip12-201 protein_coding Mus_musculus 0 457
ENSMUST00000186648 Trip12-006 protein_coding Mus_musculus 0 457
ENSMUST00000189670 Trip12-013 protein_coding Mus_musculus 0 457
ENSMUST00000186465 Trip12-001 protein_coding Mus_musculus 0 457
ENSMUST00000119013 Gm15425-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000187733 Trip12-014 nonsense_mediated_decay Mus_musculus 0 320
ENSMUST00000185720 Trip12-009 retained_intron Mus_musculus 0 267

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