C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L35a pseudogene 31
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418340 RPL35AP31-001 ENSG00000233460 9606 + 13:71845981-71846317 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLungOvaryENST00000418340
Transcript ID Bladder Brain Breast Colon Heart Lung Ovary
ENST00000418340 0.260±0.00 0.185±0.00 1.038±0.87 0.054±0.00 0.106±0.00 0.583±0.26 0.140±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VF CIL_0003VF_0001 CGP 13:69700594-71867192
CIL_0007L7 CIL_0007L7_0001 UCNEbase 13:70667313-71866528
CIL_0008M4 CIL_0008M4_0001 VISTA 13:71381704-71982907
CIL_0008M8 CIL_0008M8_0001 VISTA 13:71381958-71982706
CIL_000958 CIL_000958_0001 VISTA 13:71426717-72028802
CIL_0004PD CIL_0004PD_0002 CGP 13:71437966-72727687
CIL_0008ZX CIL_0008ZX_0001 VISTA 13:71459384-72060856
CIL_0008LW CIL_0008LW_0001 VISTA 13:71471848-72074098
CIL_000951 CIL_000951_0001 VISTA 13:71551655-72154203
CIL_000827 CIL_000827_0001 VISTA 13:71794561-72395319
CIL_0009CF CIL_0009CF_0001 VISTA 13:71819538-72421154

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122397 Gm11686-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000077495 Gm16335-001 processed_pseudogene Mus_musculus 1e-32 143

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