C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: capicua transcriptional repressor pseudogene 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418553 CICP17-001 ENSG00000227233 9606 + 7:51382284-51384660 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000418553
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000418553 0.018±0.00 0.211±0.00 0.024±0.00 0.151±0.13 0.040±0.02 0.047±0.00 0.062±0.01 0.022±0.00 0.041±0.00 0.158±0.17 0.021±0.00 0.215±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005578 Cic-201 protein_coding Mus_musculus 0 1116
ENSMUST00000165239 Cic-015 protein_coding Mus_musculus 0 1116
ENSMUST00000163320 Cic-002 protein_coding Mus_musculus 0 1116
ENSMUST00000169266 Cic-001 protein_coding Mus_musculus 0 1074
ENSMUST00000167379 Cic-004 retained_intron Mus_musculus 0 656
ENSMUST00000168956 Cic-008 nonsense_mediated_decay Mus_musculus 0 381
ENSMUST00000163819 Cic-010 processed_transcript Mus_musculus 0 191

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