C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T-box 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419047 TBX2-002 ENSG00000121068 9606 + 17:61399910-61409466 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonKidneyLiverOvaryPlacentaTestisENST00000419047
Transcript ID Adipose Adrenal Colon Kidney Liver Ovary Placenta Testis
ENST00000419047 9.030±0.00 1.564±0.00 1.894±0.00 3.450±3.18 2.000±0.00 1.282±0.73 15.856±8.65 9.186±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000703 CIL_000703_0001 CGP 17:60677453-61409466
CIL_0007RJ CIL_0007RJ_0001 VISTA 17:60951116-61552834
CIL_0007JV CIL_0007JV_0001 UCNEbase 17:61126460-61946035

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000095 Tbx2-001 protein_coding Mus_musculus 0 3001

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