C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ras-related C3 botulinum toxin substrate 1 pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419413 RAC1P4-001 ENSG00000237584 9606 - X:137441258-137441836 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000419413
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000419413 0.098±0.00 0.126±0.00 0.133±0.00 0.154±0.00 0.071±0.00 0.023±0.00 0.025±0.00 0.022±0.00 0.161±0.00 0.087±0.00 0.104±0.00 0.115±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZN CIL_0008ZN_0001 VISTA X:136934647-137535712
CIL_0000PM CIL_0000PM_0002 CGP X:137030148-137577691
CIL_0007NT CIL_0007NT_0001 UCNEbase X:137234994-137982903

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080537 Rac1-001 protein_coding Mus_musculus 0 704
ENSMUST00000145709 Rac1-003 processed_transcript Mus_musculus 0 532
ENSMUST00000100489 Rac1-002 protein_coding Mus_musculus 0 427
ENSMUST00000131513 Rac1-004 processed_transcript Mus_musculus 0 224

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