C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock 70kDa protein 8 pseudogene 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419827 HSPA8P8-001 ENSG00000229091 9606 + 7:10451311-10452526 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000419827
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000419827 0.021±0.00 0.011±0.00 0.100±0.00 0.033±0.00 0.040±0.00 0.010±0.00 0.043±0.00 0.057±0.00 0.069±0.00 0.056±0.00 0.043±0.02 0.022±0.00 0.108±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022P CIL_00022P_0001 CGP 7:8433955-10940256
CIL_000895 CIL_000895_0001 VISTA 7:10344691-10945732

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015800 Hspa8-001 protein_coding Mus_musculus 0 1317
ENSMUST00000117405 Gm15459-001 processed_pseudogene Mus_musculus 0 1314
ENSMUST00000187358 RP23-241J21.1-001 processed_pseudogene Mus_musculus 0 1155
ENSMUST00000188705 RP23-76C10.2-001 processed_pseudogene Mus_musculus 0 1112
ENSMUST00000149936 Hspa8-002 retained_intron Mus_musculus 0 992
ENSMUST00000190856 RP24-302H24.1-001 processed_pseudogene Mus_musculus 0 917
ENSMUST00000117557 Hspa8-003 protein_coding Mus_musculus 0 804
ENSMUST00000140984 Hspa8-007 retained_intron Mus_musculus 0 579
ENSMUST00000153847 Hspa8-006 processed_transcript Mus_musculus 0 473
ENSMUST00000127699 Hspa8-008 retained_intron Mus_musculus 0 411
ENSMUST00000133964 Hspa8-005 protein_coding Mus_musculus 0 383
ENSMUST00000117870 Hspa8-009 protein_coding Mus_musculus 0 340
ENSMUST00000138895 Hspa8-004 retained_intron Mus_musculus 0 316
ENSMUST00000120949 Gm9436-001 processed_pseudogene Mus_musculus 0 298

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