C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidylprolyl isomerase A (cyclophilin A) pseudogene 25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420177 PPIAP25-001 ENSG00000229303 9606 + 13:45436121-45436660 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonKidneyLiverOvaryTestisENST00000420177
Transcript ID Adrenal Brain Colon Kidney Liver Ovary Testis
ENST00000420177 0.100±0.00 0.037±0.00 0.250±0.00 0.275±0.00 0.061±0.00 0.046±0.00 0.179±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 536
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 514
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 497
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 490
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 475
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 475
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 470
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 466
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 462
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 440
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 390
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 375
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 7e-37 158

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