C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: X-ray repair complementing defective repair in Chinese hamster cells 6 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420392 XRCC6P1-001 ENSG00000237417 9606 - 10:93206857-93209627 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000420392
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000420392 0.015±0.00 0.015±0.00 0.105±0.00 0.007±0.00 0.007±0.00 0.086±0.00 0.050±0.00 0.020±0.00 0.010±0.00 0.087±0.05 0.062±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZY CIL_0000ZY_0001 CGP 10:93073475-93482317

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069530 Xrcc6-001 protein_coding Mus_musculus 0 1164
ENSMUST00000100399 Xrcc6-002 protein_coding Mus_musculus 0 1164
ENSMUST00000166311 Xrcc6-010 retained_intron Mus_musculus 0 416
ENSMUST00000170907 Xrcc6-009 retained_intron Mus_musculus 0 298

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