| Transcript ID | Bladder | Colon | Placenta |
|---|---|---|---|
| ENST00000420489 | 0.017±0.00 | 0.295±0.00 | 0.103±0.02 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | cyclic nucleotide gated channel alpha 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000420489  |
CNGA1-007 |
ENSG00000198515 |
9606 | - |
4:47936014-48012944  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008RD | CIL_0008RD_0001 | VISTA | 4:47524449-48126035 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005216 | IEA | ion channel activity |
| GO:0005222 | IBA | intracellular cAMP activated cation channel activity |
| GO:0005223 | IBA | intracellular cGMP activated cation channel activity |
| GO:0005249 | IBA | voltage-gated potassium channel activity |
| GO:0005515 | IPI | protein binding |
| GO:0005886 | TAS | plasma membrane |
| GO:0005887 | TAS | integral component of plasma membrane |
| GO:0006810 | TAS | transport |
| GO:0006811 | IEA | ion transport |
| GO:0007601 | IEA | visual perception |
| GO:0007603 | TAS | phototransduction, visible light |
| GO:0016020 | IEA | membrane |
| GO:0016056 | TAS | rhodopsin mediated signaling pathway |
| GO:0022400 | TAS | regulation of rhodopsin mediated signaling pathway |
| GO:0030553 | IBA | cGMP binding |
| GO:0042391 | IBA | regulation of membrane potential |
| GO:0055085 | IEA | transmembrane transport |
| GO:0071805 | IBA | potassium ion transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000087213
|
Cnga1-001 | protein_coding | Mus_musculus | 0 | 2344 |
|
ENSMUST00000169997
|
Cnga1-201 | protein_coding | Mus_musculus | 0 | 2296 |
