C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: formin binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420781 FNBP1-201 ENSG00000187239 9606 - 9:129887187-130043194 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000420781
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000420781 5.475±0.00 0.488±0.00 3.343±0.00 2.253±0.00 2.213±0.00 1.078±0.28 1.298±0.00 5.366±0.00 4.528±2.92 3.858±1.11 6.007±1.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006FN CIL_0006FN_0001 CGP 9:129834698-130043194
CIL_0005U8 CIL_0005U8_0001 CGP 9:129887187-130140169

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100208 Fnbp1-006 protein_coding Mus_musculus 0 1932
ENSMUST00000113560 Fnbp1-001 protein_coding Mus_musculus 0 1903
ENSMUST00000113559 Fnbp1-201 protein_coding Mus_musculus 0 1480
ENSMUST00000138581 Fnbp1-012 processed_transcript Mus_musculus 0 1480
ENSMUST00000113552 Fnbp1-002 protein_coding Mus_musculus 0 1024
ENSMUST00000113564 Fnbp1-203 protein_coding Mus_musculus 0 1024
ENSMUST00000113562 Fnbp1-202 protein_coding Mus_musculus 0 1024
ENSMUST00000100207 Fnbp1-004 protein_coding Mus_musculus 0 1000
ENSMUST00000075326 Fnbp1-007 protein_coding Mus_musculus 0 994
ENSMUST00000113555 Fnbp1-005 protein_coding Mus_musculus 0 994
ENSMUST00000073879 Fnbp1-003 protein_coding Mus_musculus 0 994
ENSMUST00000149196 Fnbp1-010 protein_coding Mus_musculus 0 577
ENSMUST00000128431 Fnbp1-013 processed_transcript Mus_musculus 0 259
ENSMUST00000136181 Fnbp1-009 protein_coding Mus_musculus 6e-37 161

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