C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HtrA serine peptidase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420892 HTRA1-002 ENSG00000166033 9606 + 10:122506691-122514907 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000420892
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000420892 48.770±0.00 49.299±0.00 2.845±0.00 62.999±30.22 61.725±57.58 32.688±30.04 8.664±0.00 17.417±14.41 52.963±48.45 11.652±0.00 7.700±0.00 140.903±124.45 261.741±107.33 48.465±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QM CIL_0000QM_0001 CGP 10:122461525-122643736

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004252 IEA serine-type endopeptidase activity
GO:0005515 IEA protein binding
GO:0006508 IEA proteolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153290 Htra1-002 processed_transcript Mus_musculus 0 1022
ENSMUST00000006367 Htra1-001 protein_coding Mus_musculus 0 1022
ENSMUST00000150717 Htra1-003 retained_intron Mus_musculus 0 231

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