C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421099 U82670.9-001 ENSG00000229979 9606 - X:153052150-153052413 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverMuscleTestisENST00000421099
Transcript ID Breast Colon Liver Muscle Testis
ENST00000421099 0.061±0.00 0.113±0.00 0.169±0.00 0.056±0.00 0.133±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000111 CIL_000111_0001 CGP X:152988824-153060467

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178676 Gm10182-201 processed_pseudogene Mus_musculus 0 294
ENSMUST00000102552 Hmgn2-003 protein_coding Mus_musculus 0 294
ENSMUST00000102553 Hmgn2-001 protein_coding Mus_musculus 0 294
ENSMUST00000075602 Gm10282-201 protein_coding Mus_musculus 0 294
ENSMUST00000189273 RP23-429J21.2-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000093430 Gm7125-201 processed_pseudogene Mus_musculus 0 289
ENSMUST00000121537 Gm7931-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000137456 Hmgn2-010 processed_transcript Mus_musculus 0 281
ENSMUST00000138458 Hmgn2-004 processed_transcript Mus_musculus 0 281
ENSMUST00000105893 Hmgn2-009 protein_coding Mus_musculus 0 281
ENSMUST00000123234 Hmgn2-012 protein_coding Mus_musculus 0 278
ENSMUST00000125266 Hmgn2-011 processed_transcript Mus_musculus 0 278
ENSMUST00000159886 Gm10357-001 processed_pseudogene Mus_musculus 0 276
ENSMUST00000120716 Hmgn2-ps1-001 processed_pseudogene Mus_musculus 0 267
ENSMUST00000100472 Hmgn2-007 protein_coding Mus_musculus 0 267
ENSMUST00000189471 RP24-176P22.2-001 processed_pseudogene Mus_musculus 0 261
ENSMUST00000120483 Gm14008-001 processed_pseudogene Mus_musculus 0 261
ENSMUST00000153622 Hmgn2-013 retained_intron Mus_musculus 0 246
ENSMUST00000136327 Hmgn2-006 protein_coding Mus_musculus 0 246
ENSMUST00000165525 Gm16494-201 protein_coding Mus_musculus 0 235
ENSMUST00000120954 Gm12196-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000071770 Gm5899-201 processed_pseudogene Mus_musculus 0 200
ENSMUST00000074801 Gm10298-201 processed_pseudogene Mus_musculus 0 195
ENSMUST00000130809 Hmgn2-005 retained_intron Mus_musculus 0 195
ENSMUST00000145025 Hmgn2-002 retained_intron Mus_musculus 0 195
ENSMUST00000153501 Gm16510-001 processed_pseudogene Mus_musculus 7e-34 147
ENSMUST00000136859 Hmgn2-008 retained_intron Mus_musculus 6e-20 100

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