C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon induced with helicase C domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421365 IFIH1-002 ENSG00000115267 9606 - 2:162310147-162318684 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungMuscleENST00000421365
Transcript ID Lung Muscle
ENST00000421365 1.760±0.00 0.123±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KX CIL_0005KX_0001 CGP 2:162170684-162318703
CIL_0005KY CIL_0005KY_0001 CGP 2:162267079-162371595

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003725 TAS double-stranded RNA binding
GO:0003727 IDA single-stranded RNA binding
GO:0004386 IEA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0008270 IDA zinc ion binding
GO:0009597 TAS detection of virus
GO:0009615 TAS response to virus
GO:0016032 IEA viral process
GO:0016925 IDA protein sumoylation
GO:0032480 TAS negative regulation of type I interferon production
GO:0032727 TAS positive regulation of interferon-alpha production
GO:0032728 TAS positive regulation of interferon-beta production
GO:0034344 TAS regulation of type III interferon production
GO:0039528 TAS cytoplasmic pattern recognition receptor signaling pathway in response to virus
GO:0042981 IEA regulation of apoptotic process
GO:0043021 IPI ribonucleoprotein complex binding
GO:0045087 TAS innate immune response

Homologs

No Homologs available.

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