C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005KX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000078098-ENSG00000115267 CGP 9606 2:162170684-162318703
GeneTranscriptPositionBiotype
ENSG00000078098 (FAP)
fibroblast activation protein, alpha 		ENST00000188790 (FAP-001) 162170690-162243535 protein_coding
ENST00000422436 (FAP-004) 162170684-162198826 nonsense_mediated_decay
ENST00000443424 (FAP-015) 162170718-162243456 protein_coding
ENST00000447386 (FAP-007) 162219142-162243048 protein_coding
ENST00000450031 (FAP-012) 162219857-162243102 nonsense_mediated_decay
ENST00000461506 (FAP-010) 162172841-162183583 retained_intron
ENST00000462608 (FAP-014) 162170684-162173781 nonsense_mediated_decay
ENST00000465088 (FAP-011) 162198624-162203145 retained_intron
ENST00000465424 (FAP-008) 162193559-162198842 retained_intron
ENST00000480044 (FAP-005) 162170685-162176669 retained_intron
ENST00000480838 (FAP-003) 162209620-162243413 retained_intron
ENST00000493182 (FAP-006) 162243347-162245151 processed_transcript
ENST00000497414 (FAP-009) 162188172-162195037 retained_intron
ENSG00000115267 (IFIH1)
interferon induced with helicase C domain 1 		ENST00000263642 (IFIH1-001) 162267079-162318703 protein_coding
ENST00000421365 (IFIH1-002) 162310147-162318684 protein_coding
ENST00000464129 (IFIH1-003) 162293564-162307170 retained_intron
ENSG00000236841 (AC007750.5)
 ENST00000418968 (AC007750.5-001) 162159818-162172916 antisense
ENST00000609668 (AC007750.5-002) 162159762-162169698 antisense
CIL_0005KX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000392-ENSMUSG00000026896 CGP 10090 2:62500943-62646255
GeneTranscriptPositionBiotype
ENSMUSG00000000392 (Fap)
fibroblast activation protein 		ENSMUST00000000402 (Fap-008) 62501184-62573851 protein_coding
ENSMUST00000102732 (Fap-001) 62500943-62574075 protein_coding
ENSMUST00000128139 (Fap-007) 62501123-62503424 nonsense_mediated_decay
ENSMUST00000136297 (Fap-003) 62535783-62573923 retained_intron
ENSMUST00000152085 (Fap-004) 62501113-62573980 processed_transcript
ENSMUST00000172676 (Fap-002) 62527349-62563717 retained_intron
ENSMUST00000173745 (Fap-005) 62548584-62573560 protein_coding
ENSMUST00000174234 (Fap-006) 62501184-62573851 protein_coding
ENSMUST00000174448 (Fap-009) 62501184-62573851 protein_coding
ENSMUSG00000026896 (Ifih1)
interferon induced with helicase C domain 1 		ENSMUST00000028259 (Ifih1-001) 62595798-62646211 protein_coding
ENSMUST00000112459 (Ifih1-003) 62597447-62646153 protein_coding
ENSMUST00000175964 (Ifih1-002) 62633488-62646158 retained_intron
ENSMUST00000176388 (Ifih1-004) 62629453-62639473 processed_transcript
ENSMUST00000176431 (Ifih1-005) 62608250-62646255 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005KX_0001ENSG00000078098ENST00000188790ENST00000422436ENST00000443424ENST00000447386ENST00000450031ENST00000461506ENST00000462608ENST00000465088ENST00000465424ENST00000480044ENST00000480838ENST00000493182ENST00000497414ENSG00000115267ENST00000263642ENST00000421365ENST00000464129ENSG00000236841ENST00000418968ENST00000609668CIL_0005KX_0002ENSMUSG00000000392ENSMUST00000000402ENSMUST00000102732ENSMUST00000128139ENSMUST00000136297ENSMUST00000152085ENSMUST00000172676ENSMUST00000173745ENSMUST00000174234ENSMUST00000174448ENSMUSG00000026896ENSMUST00000028259ENSMUST00000112459ENSMUST00000175964ENSMUST00000176388ENSMUST00000176431
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005KX_0001ENSG00000078098ENST00000188790ENST00000422436ENST00000443424ENST00000447386ENST00000461506ENST00000462608ENST00000465088ENST00000480044ENST00000480838ENST00000497414ENSG00000115267ENST00000263642ENST00000421365ENST00000464129ENSG00000236841ENST00000418968ENST00000609668CIL_0005KX_0002ENSMUSG00000000392ENSMUST00000000402ENSMUST00000102732ENSMUST00000128139ENSMUST00000136297ENSMUST00000152085ENSMUST00000172676ENSMUST00000173745ENSMUST00000174234ENSMUST00000174448ENSMUSG00000026896ENSMUST00000028259ENSMUST00000112459ENSMUST00000175964ENSMUST00000176431
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000078098 ENST00000188790 2.507±0.00 N/A N/A N/A 4.183±2.57 0.963±0.76 0.140±0.00 0.475±0.00 N/A 1.015±0.00 N/A 0.968±0.48 2.628±0.08 2.038±0.00
ENST00000422436 1.290±0.00 0.571±0.00 N/A 0.355±0.00 1.455±0.00 N/A N/A N/A 0.064±0.00 N/A 0.810±0.00 0.834±0.03 N/A 1.325±0.00
ENST00000443424 N/A N/A N/A 0.142±0.00 N/A 0.174±0.00 0.177±0.00 N/A 0.451±0.00 0.524±0.29 N/A 1.144±0.00 2.183±0.77 N/A
ENST00000447386 N/A N/A 0.127±0.00 N/A N/A N/A N/A 0.106±0.00 0.061±0.00 0.919±0.00 N/A N/A N/A 1.041±0.00
ENST00000450031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.557±0.00 5.485±0.00 N/A 1.538±0.00
ENST00000462608 N/A N/A N/A N/A N/A N/A N/A N/A 0.052±0.00 N/A N/A N/A N/A 1.097±0.00
ENST00000465088 N/A N/A 0.695±0.00 N/A N/A N/A N/A N/A 0.129±0.00 N/A 1.322±0.00 N/A N/A N/A
ENST00000465424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480044 N/A N/A N/A N/A N/A N/A 0.165±0.00 N/A 0.021±0.00 N/A N/A N/A N/A N/A
ENST00000480838 N/A N/A N/A 0.149±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497414 N/A N/A N/A N/A N/A N/A 0.200±0.00 N/A N/A N/A 0.826±0.00 N/A N/A N/A
ENSG00000115267 ENST00000263642 2.096±0.00 4.465±0.00 N/A 0.750±0.26 3.426±0.51 2.022±0.90 1.528±0.00 4.164±0.91 1.937±0.10 4.012±0.87 0.348±0.26 4.064±1.80 4.098±1.36 2.371±1.46
ENST00000421365 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.760±0.00 0.123±0.00 N/A N/A N/A
ENST00000464129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.350±0.00 N/A N/A N/A
ENSG00000236841 ENST00000418968 N/A N/A N/A 0.083±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609668 N/A N/A N/A 0.386±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000392 ENSMUST00000000402 N/A 0.133±0.04 N/A N/A N/A 0.213±0.00 N/A N/A 0.043±0.00 N/A N/A 0.406±0.19 N/A 0.025±0.02
ENSMUST00000102732 1.834±0.19 0.168±0.00 0.269±0.00 0.227±0.17 4.102±1.76 0.427±0.14 0.692±0.16 0.143±0.02 0.061±0.03 0.149±0.05 0.380±0.04 0.425±0.20 0.265±0.23 0.017±0.00
ENSMUST00000128139 N/A 0.551±0.34 N/A 5.610±0.00 N/A N/A N/A 0.142±0.06 0.262±0.10 N/A N/A 1.543±0.99 0.974±0.89 N/A
ENSMUST00000136297 N/A 0.158±0.00 N/A N/A N/A 0.289±0.00 N/A 0.033±0.00 0.041±0.00 0.073±0.00 N/A 0.300±0.12 0.008±0.00 N/A
ENSMUST00000152085 1.031±0.18 0.239±0.08 N/A 0.619±0.35 3.720±1.82 0.226±0.00 0.781±0.19 0.115±0.05 0.102±0.08 0.142±0.07 0.506±0.12 0.769±0.16 0.448±0.25 N/A
ENSMUST00000172676 N/A 0.113±0.02 N/A N/A N/A 0.127±0.04 N/A 0.050±0.02 0.030±0.00 0.058±0.00 N/A N/A N/A N/A
ENSMUST00000173745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A
ENSMUST00000174234 N/A 0.063±0.00 N/A N/A N/A 0.165±0.00 N/A 0.060±0.00 0.035±0.00 N/A N/A 0.067±0.00 0.014±0.00 N/A
ENSMUST00000174448 N/A 0.191±0.00 N/A N/A 2.026±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026896 ENSMUST00000028259 1.816±0.21 1.998±0.00 1.674±0.01 0.119±0.07 1.690±0.35 3.185±0.37 0.625±0.14 1.509±0.32 2.209±1.00 2.756±0.36 0.267±0.06 1.213±0.67 1.055±0.41 0.088±0.02
ENSMUST00000112459 N/A N/A 1.402±0.14 0.212±0.10 N/A N/A N/A N/A 1.053±0.44 N/A 0.418±0.10 2.775±0.27 3.015±2.16 0.356±0.00
ENSMUST00000175964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00
ENSMUST00000176388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.721±0.07 N/A 0.083±0.01

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