C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myeloid differentiation primary response 88
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421516 MYD88-006 ENSG00000172936 9606 + 3:38138665-38143022 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000421516
Transcript ID Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000421516 13.420±0.00 0.150±0.00 2.485±0.00 2.338±0.00 2.546±0.00 5.202±0.00 5.625±0.00 5.220±4.80 0.555±0.00 3.679±3.43 8.813±6.14 2.297±0.59

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002755 IEA MyD88-dependent toll-like receptor signaling pathway
GO:0005515 IEA protein binding
GO:0007165 IEA signal transduction
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0070976 IEA TIR domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035092 Myd88-001 protein_coding Mus_musculus 0 678
ENSMUST00000150837 Myd88-002 retained_intron Mus_musculus 0 309

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