C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: baculoviral IAP repeat containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421745 BIRC6-001 ENSG00000115760 9606 + 2:32357028-32618899 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000421745
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000421745 2.488±0.00 2.005±0.00 1.831±0.00 3.713±0.70 4.541±3.24 2.657±1.19 1.584±0.00 3.950±1.95 0.824±0.00 1.609±0.40 1.950±0.17 3.938±4.37 1.260±0.14 1.397±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JH CIL_0003JH_0002 CGP 2:32277910-32618899
CIL_0003TD CIL_0003TD_0002 CGP 2:32357028-32821051

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 IDA spindle pole
GO:0001890 IEA placenta development
GO:0004842 IDA:IEA ubiquitin-protein transferase activity
GO:0004869 IMP cysteine-type endopeptidase inhibitor activity
GO:0005515 IPI:IEA protein binding
GO:0005768 IDA endosome
GO:0005802 IDA trans-Golgi network
GO:0005815 IDA microtubule organizing center
GO:0006464 IEA cellular protein modification process
GO:0006468 TAS protein phosphorylation
GO:0006915 IEA apoptotic process
GO:0007067 IEA mitotic nuclear division
GO:0008284 IEA positive regulation of cell proliferation
GO:0010951 IEA negative regulation of endopeptidase activity
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016567 TAS protein ubiquitination
GO:0016881 IEA acid-amino acid ligase activity
GO:0030496 IDA midbody
GO:0032465 IMP:IEA regulation of cytokinesis
GO:0042127 TAS regulation of cell proliferation
GO:0043066 TAS negative regulation of apoptotic process
GO:0060711 IEA labyrinthine layer development
GO:0060712 IEA spongiotrophoblast layer development
GO:2001237 IMP negative regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180037 Birc6-001 protein_coding Mus_musculus 0 19560
ENSMUST00000182944 Birc6-003 protein_coding Mus_musculus 0 18140
ENSMUST00000182133 Birc6-005 protein_coding Mus_musculus 0 17990
ENSMUST00000182597 Birc6-004 protein_coding Mus_musculus 0 17960
ENSMUST00000183224 Birc6-007 protein_coding Mus_musculus 0 13290
ENSMUST00000177957 Birc6-002 protein_coding Mus_musculus 0 3308
ENSMUST00000183249 Birc6-014 nonsense_mediated_decay Mus_musculus 0 2881
ENSMUST00000182164 Birc6-018 retained_intron Mus_musculus 0 2856
ENSMUST00000182845 Birc6-011 protein_coding Mus_musculus 0 1519
ENSMUST00000182157 Birc6-017 retained_intron Mus_musculus 0 1432
ENSMUST00000182382 Birc6-006 retained_intron Mus_musculus 0 1321
ENSDART00000114100 birc6-201 protein_coding Danio_rerio 0 1284
ENSMUST00000117208 Gm14886-001 processed_pseudogene Mus_musculus 0 1275
ENSDART00000157328 birc6-001 protein_coding Danio_rerio 0 1188
ENSMUST00000182278 Birc6-012 protein_coding Mus_musculus 0 1016
ENSMUST00000182147 Birc6-025 retained_intron Mus_musculus 0 911
ENSMUST00000182221 Birc6-022 retained_intron Mus_musculus 0 686
ENSMUST00000182817 Birc6-024 nonsense_mediated_decay Mus_musculus 0 641
ENSMUST00000182631 Birc6-021 retained_intron Mus_musculus 0 494
ENSMUST00000182257 Birc6-008 retained_intron Mus_musculus 0 464
ENSMUST00000182804 Birc6-016 retained_intron Mus_musculus 0 370
ENSMUST00000183189 Birc6-009 retained_intron Mus_musculus 0 318
ENSMUST00000182108 Birc6-019 retained_intron Mus_musculus 0 287
ENSMUST00000182206 Birc6-013 retained_intron Mus_musculus 4e-38 167
ENSMUST00000182362 Birc6-010 retained_intron Mus_musculus 3e-34 154

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