C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cadherin 1, type 1, E-cadherin (epithelial)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422392 CDH1-004 ENSG00000039068 9606 + 16:68737352-68833536 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000422392
Transcript ID Ovary Testis
ENST00000422392 8.285±0.00 0.070±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Y9 CIL_0004Y9_0003 CGP 16:68636189-68835548
CIL_0004RG CIL_0004RG_0001 CGP 16:68737225-69085180

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001948 IPI glycoprotein binding
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005737 IDA cytoplasm
GO:0005768 IEA endosome
GO:0005802 IMP trans-Golgi network
GO:0005886 IDA plasma membrane
GO:0005913 IDA cell-cell adherens junction
GO:0005925 IDA focal adhesion
GO:0006915 TAS apoptotic process
GO:0006921 TAS cellular component disassembly involved in execution phase of apoptosis
GO:0007156 NAS:IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0008013 IDA beta-catenin binding
GO:0009898 IDA cytoplasmic side of plasma membrane
GO:0015629 IDA actin cytoskeleton
GO:0016020 IEA membrane
GO:0016021 IDA integral component of membrane
GO:0016235 IDA aggresome
GO:0016328 IDA lateral plasma membrane
GO:0016337 IDA single organismal cell-cell adhesion
GO:0016342 IDA catenin complex
GO:0022408 IMP negative regulation of cell-cell adhesion
GO:0022617 TAS extracellular matrix disassembly
GO:0030054 TAS cell junction
GO:0030198 TAS extracellular matrix organization
GO:0030506 IPI ankyrin binding
GO:0032794 IPI GTPase activating protein binding
GO:0034329 TAS cell junction assembly
GO:0034332 IMP adherens junction organization
GO:0042993 IDA positive regulation of transcription factor import into nucleus
GO:0043296 IDA apical junction complex
GO:0045216 TAS cell-cell junction organization
GO:0045295 IPI gamma-catenin binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0048471 IDA perinuclear region of cytoplasm
GO:0050776 TAS regulation of immune response
GO:0050839 NAS cell adhesion molecule binding
GO:0070062 IDA extracellular vesicular exosome
GO:0071285 IDA cellular response to lithium ion
GO:0071681 IDA cellular response to indole-3-methanol
GO:0072659 IDA protein localization to plasma membrane
GO:0090002 IMP establishment of protein localization to plasma membrane

Homologs

No Homologs available.

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